Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 AC240442.1-201ENST00000616055 283 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 AC099654.12-201ENST00000639868 649 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 AC091304.10-201ENST00000641554 121 ntBASIC-0.64□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 RNU6-996P-201ENST00000365438 107 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 SNORD28-201ENST00000384706 75 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 MIR588-201ENST00000384900 83 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 AL593851.1-201ENST00000426171 157 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 SNORA18.6-201ENST00000516792 115 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 RNU6-897P-201ENST00000517135 105 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 AC125232.2-201ENST00000592457 143 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 AC008536.2-201ENST00000607284 349 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 MIR3666-201ENST00000607845 111 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
AP1S3Q96PC3 MIR410-201ENST00000362222 80 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 SNORD38C-201ENST00000384381 69 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 MIR518F-201ENST00000384973 87 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 POLR2KP2-201ENST00000438155 177 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 AL033528.1-201ENST00000453780 140 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 AC134698.4-201ENST00000523451 826 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 AC093023.1-201ENST00000547375 507 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 MIR548AD-201ENST00000584780 82 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 MIR8064-201ENST00000612863 90 ntBASIC-0.66□□□□□ -2.52
AP1S3Q96PC3 MIR30D-201ENST00000362283 70 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 SNORD114-7-201ENST00000362520 77 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 RNU6-324P-201ENST00000363957 106 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 RNU6-268P-201ENST00000364174 107 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 AL606923.1-201ENST00000406616 190 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 MTCO1P20-201ENST00000425366 358 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 UQCRBP2-201ENST00000447827 297 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 AC105029.1-201ENST00000520250 669 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 AL442067.1-201ENST00000613261 223 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 AC022306.2-201ENST00000617563 647 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.67□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 RNU6-82P-201ENST00000363970 107 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 SNORD14E-201ENST00000364009 85 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 RNU6-214P-201ENST00000384130 107 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 MIR563-201ENST00000385080 79 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 RNU6-248P-201ENST00000410720 107 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 RNU6-847P-201ENST00000411115 108 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 MTATP6P18-201ENST00000417994 673 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 MTND2P18-201ENST00000419962 1030 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 MTND3P23-201ENST00000431980 347 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 TRBVB-201ENST00000477100 408 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 IGLVI-20-201ENST00000519296 130 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 MIR4645-201ENST00000583158 77 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 AC005972.2-201ENST00000604690 348 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 SNORA70.25-201ENST00000612741 95 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 AL109933.3-201ENST00000619095 188 ntBASIC-0.68□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 SNORA63C-201ENST00000364578 129 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 RNU6-38P-201ENST00000384085 107 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 MIR329-2-201ENST00000385029 84 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 snoU13.2-201ENST00000459201 104 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 SNORA19.2-201ENST00000516013 114 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 MIR5696-201ENST00000578474 85 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 POLR3GP1-201ENST00000594073 261 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 AC011458.1-201ENST00000604034 617 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 AL354950.2-201ENST00000617939 290 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 AC244669.1-204ENST00000621564 178 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 MIR6514-201ENST00000622549 70 ntBASIC-0.69□□□□□ -2.52
AP1S3Q96PC3 SNORD114-31-201ENST00000363219 75 ntBASIC-0.7□□□□□ -2.52
AP1S3Q96PC3 SNORD49B-201ENST00000365172 72 ntBASIC-0.7□□□□□ -2.52
AP1S3Q96PC3 RNU6-790P-201ENST00000384479 105 ntBASIC-0.7□□□□□ -2.52
AP1S3Q96PC3 Z99497.1-201ENST00000421282 135 ntBASIC-0.7□□□□□ -2.52
AP1S3Q96PC3 CYCSP46-201ENST00000423569 204 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms