Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.61□□□□□ -2.51
CCDC42Q96M95 SNORD11.1-201ENST00000459482 85 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 ACA59.1-201ENST00000515966 143 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 RNU6-469P-201ENST00000516253 101 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 AC090617.3-201ENST00000573670 475 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 Z94722.1-201ENST00000604328 474 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 AL109933.3-201ENST00000619095 188 ntBASIC-0.61□□□□□ -2.51
CCDC42Q96M95 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.61□□□□□ -2.51
CCDC42Q96M95 AC121333.1-201ENST00000567488 2709 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 RNU6-187P-201ENST00000384139 106 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.62□□□□□ -2.51
CCDC42Q96M95 USP9YP16-201ENST00000430287 407 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 USP9YP23-201ENST00000455085 407 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 RNU7-185P-201ENST00000459215 60 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.62□□□□□ -2.51
CCDC42Q96M95 AC091959.1-201ENST00000495857 238 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 RNA5SP401-201ENST00000515920 127 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.62□□□□□ -2.51
CCDC42Q96M95 AC018448.1-201ENST00000552843 316 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 AC125232.2-201ENST00000592457 143 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 MIR6828-201ENST00000636181 60 ntBASIC-0.62□□□□□ -2.51
CCDC42Q96M95 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 MIR106A-201ENST00000384870 81 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 MIR1257-201ENST00000408490 117 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 RNA5SP475-201ENST00000410568 110 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 USMG5P1-201ENST00000425964 177 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.63□□□□□ -2.51
CCDC42Q96M95 RNU2-13P-201ENST00000515909 113 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 SCARNA8-201ENST00000515924 131 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 AC023510.2-201ENST00000622162 746 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 MIR3674-201ENST00000636576 68 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 AC099654.12-201ENST00000639868 649 ntBASIC-0.63□□□□□ -2.51
CCDC42Q96M95 AC010332.2-201ENST00000613083 1904 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 RNU4-20P-201ENST00000365601 151 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.64□□□□□ -2.51
CCDC42Q96M95 MTCO2P4-201ENST00000517968 247 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 MIR499B-201ENST00000636498 73 ntBASIC-0.64□□□□□ -2.51
CCDC42Q96M95 RNU6-553P-201ENST00000364047 96 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 SNORA1.2-201ENST00000365189 134 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 RNY3P10-201ENST00000384764 102 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 RNU6-847P-201ENST00000411115 108 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 AC090844.1-201ENST00000422019 156 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 MTND1P17-201ENST00000448961 204 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 AC109347.2-201ENST00000610220 349 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 AF246928.1-201ENST00000623768 87 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 AC079248.2-201ENST00000623779 326 ntBASIC-0.65□□□□□ -2.51
CCDC42Q96M95 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.66□□□□□ -2.52
CCDC42Q96M95 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.66□□□□□ -2.52
CCDC42Q96M95 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.66□□□□□ -2.52
CCDC42Q96M95 MIR6740-201ENST00000618268 113 ntBASIC-0.66□□□□□ -2.52
CCDC42Q96M95 RNU6-324P-201ENST00000363957 106 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 SNORD114-12-201ENST00000365400 75 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 MIR517A-201ENST00000385001 87 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 MTCO2P19-201ENST00000427513 598 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 EIF1P2-201ENST00000428233 350 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 SNRPGP14-201ENST00000435400 219 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 AL031667.1-201ENST00000440222 725 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 MTND1P11-201ENST00000456661 876 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 RPL39P34-201ENST00000477141 156 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 RNA5SP480-201ENST00000516840 109 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 RNU6-232P-201ENST00000517144 64 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 RNU7-181P-201ENST00000517234 74 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 AC092954.2-201ENST00000609103 430 ntBASIC-0.67□□□□□ -2.52
CCDC42Q96M95 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.67□□□□□ -2.52
CCDC42Q96M95 RNU6-161P-201ENST00000363051 106 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 RNA5SP275-201ENST00000363936 118 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 RNU6-442P-201ENST00000383968 104 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 RNU6-95P-201ENST00000384697 107 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 SNORA26-201ENST00000391286 122 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 RNU6-855P-201ENST00000410395 104 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 MTND2P18-201ENST00000419962 1030 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 AL353193.1-201ENST00000421444 268 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.68□□□□□ -2.52
CCDC42Q96M95 MTATP6P13-201ENST00000438531 667 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 RNU6-625P-201ENST00000459412 107 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 TRBVB-201ENST00000477100 408 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 AC022306.2-201ENST00000617563 647 ntBASIC-0.68□□□□□ -2.52
CCDC42Q96M95 SNORD115-30-201ENST00000364117 82 ntBASIC-0.69□□□□□ -2.52
CCDC42Q96M95 RNU6-652P-201ENST00000365488 107 ntBASIC-0.69□□□□□ -2.52
CCDC42Q96M95 POLR2KP2-201ENST00000438155 177 ntBASIC-0.69□□□□□ -2.52
CCDC42Q96M95 RNU7-125P-201ENST00000458760 62 ntBASIC-0.69□□□□□ -2.52
CCDC42Q96M95 snoU13.16-201ENST00000459350 104 ntBASIC-0.69□□□□□ -2.52
CCDC42Q96M95 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.69□□□□□ -2.52
CCDC42Q96M95 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.69□□□□□ -2.52
CCDC42Q96M95 AC087685.1-201ENST00000587507 141 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms