Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-1170P-201ENST00000515974 106 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 Y_RNA.701-201ENST00000516812 110 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 RNU7-110P-201ENST00000516891 62 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 Y_RNA.715-201ENST00000517082 110 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 MIR3937-201ENST00000580135 106 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 MIR4680-201ENST00000580906 66 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 MIR4298-201ENST00000584380 73 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 MIR4295-201ENST00000585286 85 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 AC124312.5-201ENST00000604451 268 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 AL353770.2-201ENST00000620024 78 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 AC090574.1-201ENST00000623186 233 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LINC00477Q96M19 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LINC00477Q96M19 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.84□□□□□ -2.27
LINC00477Q96M19 RNU6-1123P-201ENST00000362347 106 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 Y_RNA.16-201ENST00000362421 102 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 RNU6-797P-201ENST00000363101 109 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 RNU1-124P-201ENST00000363861 145 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 RNU6-801P-201ENST00000364087 105 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 Y_RNA.214-201ENST00000364201 112 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 Y_RNA.253-201ENST00000364562 112 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 Y_RNA.265-201ENST00000364677 108 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 U8.7-201ENST00000364940 136 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 SNORA22-201ENST00000383907 134 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 Y_RNA.512-201ENST00000384518 102 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 SNORA22C-201ENST00000384614 134 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 SNORA26.5-201ENST00000391215 123 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 MIR548P-201ENST00000408336 84 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 Y_RNA.602-201ENST00000410535 92 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC113618.1-201ENST00000416747 285 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC104332.1-201ENST00000440471 797 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC114811.1-201ENST00000507207 168 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 RNU7-40P-201ENST00000516397 64 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 RNA5SP404-201ENST00000517118 132 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC011604.1-201ENST00000545978 196 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 MIR3664-201ENST00000579074 99 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC104984.5-201ENST00000586878 94 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 AL513423.1-201ENST00000621695 132 ntBASIC0.84□□□□□ -2.27
LINC00477Q96M19 AC134026.1-201ENST00000623249 2239 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 Y_RNA.64-201ENST00000362845 102 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 SNORD68-201ENST00000363214 84 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 SNORD113-8-201ENST00000363497 74 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 Y_RNA.222-201ENST00000364264 102 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 Y_RNA.230-201ENST00000364348 109 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 Y_RNA.439-201ENST00000384119 94 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 Y_RNA.460-201ENST00000384255 102 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 Y_RNA.541-201ENST00000384640 113 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
LINC00477Q96M19 AL034345.1-201ENST00000407768 123 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 RNU6-855P-201ENST00000410395 104 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 MRPL35P3-201ENST00000421557 364 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC117454.1-201ENST00000491120 168 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.83□□□□□ -2.28
LINC00477Q96M19 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 RNU6-1278P-201ENST00000516130 107 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 RNU2-56P-201ENST00000516826 190 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 AP002004.2-201ENST00000531656 154 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 RPL21P9-201ENST00000556149 474 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC113195.1-201ENST00000579952 141 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.83□□□□□ -2.28
LINC00477Q96M19 MIR6715A-201ENST00000615929 79 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 MIR8065-201ENST00000620577 100 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC022140.2-201ENST00000623500 188 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 AC134503.1-201ENST00000633048 54 ntBASIC0.83□□□□□ -2.28
LINC00477Q96M19 SNORD114-7-201ENST00000362520 77 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 Y_RNA.383-201ENST00000383855 97 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 SNORD63-201ENST00000384262 68 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 SNORD115-46-201ENST00000390982 71 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 Y_RNA.621-201ENST00000411065 96 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 AC022028.1-201ENST00000412054 408 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 AL390729.2-201ENST00000416137 156 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 BTF3P4-201ENST00000418852 495 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 AC005042.3-201ENST00000453230 174 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 LINC01399-202ENST00000458450 244 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 snoU13.23-201ENST00000458863 104 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 U8.19-201ENST00000459095 133 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 HMGN1P10-201ENST00000474557 553 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 NDUFA4P2-201ENST00000489989 244 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 RNU6-475P-201ENST00000516073 104 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 RNU6-496P-201ENST00000516145 99 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 AC024405.2-202ENST00000532731 184 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 RPS29P30-201ENST00000600975 111 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 AC006380.1-201ENST00000603598 186 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 Y_RNA.772-201ENST00000606692 102 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 AC011373.1-201ENST00000607270 237 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.82□□□□□ -2.28
LINC00477Q96M19 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.82□□□□□ -2.28
LINC00477Q96M19 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.82□□□□□ -2.28
LINC00477Q96M19 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LINC00477Q96M19 Y_RNA.128-201ENST00000363391 112 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 Y_RNA.210-201ENST00000364161 110 ntBASIC0.81□□□□□ -2.28
LINC00477Q96M19 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms