Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 Y_RNA.144-201ENST00000363521 113 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 Y_RNA.237-201ENST00000364439 102 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 RNU6-574P-201ENST00000384265 107 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 RNU6-463P-201ENST00000384340 107 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 SNORD116-13-201ENST00000384408 92 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 Y_RNA.556-201ENST00000384677 113 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 AL158823.1-201ENST00000418441 478 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 MTND4LP30-201ENST00000454092 297 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.11□□□□□ -2.07
SNX27Q96L92 SERF1AP1-201ENST00000514575 187 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 RNU6-191P-201ENST00000516295 94 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX27Q96L92 U4.1-201ENST00000620349 87 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 7SK.10-201ENST00000621414 298 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.11□□□□□ -2.07
SNX27Q96L92 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNX27Q96L92 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
SNX27Q96L92 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SNX27Q96L92 MIR520A-201ENST00000384862 85 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 RNU11-5P-201ENST00000391216 129 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 RNA5SP511-201ENST00000410487 115 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 RNU2-7P-201ENST00000410794 178 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 RNA5SP100-201ENST00000410903 110 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 RNA5SP59-201ENST00000410922 110 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 AC069257.2-201ENST00000441819 155 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.1□□□□□ -2.07
SNX27Q96L92 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 RPS26P45-201ENST00000471748 340 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
SNX27Q96L92 AL512605.2-201ENST00000592972 256 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 AC008555.8-201ENST00000623602 2168 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 AL589743.1-201ENST00000551932 2712 ntBASIC2.1□□□□□ -2.07
SNX27Q96L92 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SNX27Q96L92 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SNX27Q96L92 Y_RNA.288-201ENST00000364854 92 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 Y_RNA.294-201ENST00000364916 102 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 Y_RNA.368-201ENST00000365547 113 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 Y_RNA.456-201ENST00000384232 111 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 RNA5SP212-201ENST00000391223 107 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 RPS20P10-201ENST00000451209 253 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
SNX27Q96L92 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.09□□□□□ -2.07
SNX27Q96L92 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SNX27Q96L92 AC018630.2-201ENST00000534866 2403 ntBASIC2.09□□□□□ -2.08
SNX27Q96L92 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.09□□□□□ -2.08
SNX27Q96L92 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNX27Q96L92 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNX27Q96L92 RNU4-13P-201ENST00000364019 141 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 Y_RNA.310-201ENST00000365063 113 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 RNU6-296P-201ENST00000384608 107 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 RNA5SP109-201ENST00000391010 116 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 AL162725.1-201ENST00000435405 301 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 AC091959.1-201ENST00000495857 238 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 AC015720.1-201ENST00000565251 277 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 MIR3149-201ENST00000584629 83 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 AC004832.4-201ENST00000608952 331 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 MIR6079-201ENST00000635807 62 ntBASIC2.08□□□□□ -2.08
SNX27Q96L92 MIR335-201ENST00000362173 94 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 SNORA63D-201ENST00000364359 132 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 AL135790.2-201ENST00000437701 267 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 HSPE1P21-201ENST00000438283 308 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 AL606517.2-201ENST00000442855 241 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX27Q96L92 SNORD127-201ENST00000458892 86 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 RNU7-94P-201ENST00000459576 63 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 AC091021.1-201ENST00000468051 388 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 AC136628.3-201ENST00000521868 290 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX27Q96L92 AC005972.2-201ENST00000604690 348 ntBASIC2.07□□□□□ -2.08
SNX27Q96L92 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
SNX27Q96L92 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SNX27Q96L92 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SNX27Q96L92 Y_RNA.452-201ENST00000384202 108 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 RNU2-38P-201ENST00000410856 79 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 RPL23AP6-201ENST00000446637 472 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 SNORA27.4-201ENST00000516650 95 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 RNA5SP437-201ENST00000517249 129 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.06□□□□□ -2.08
SNX27Q96L92 AC022217.4-201ENST00000604389 163 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 AC068647.2-201ENST00000637380 353 ntBASIC2.06□□□□□ -2.08
SNX27Q96L92 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SNX27Q96L92 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SNX27Q96L92 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SNX27Q96L92 RNU6-801P-201ENST00000364087 105 ntBASIC2.05□□□□□ -2.08
SNX27Q96L92 Y_RNA.267-201ENST00000364679 109 ntBASIC2.05□□□□□ -2.08
SNX27Q96L92 RNU6-702P-201ENST00000364982 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms