Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNORD14.1-201ENST00000365609 90 ntBASIC0.45□□□□□ -2.34
ECHDC3Q96DC8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
ECHDC3Q96DC8 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
ECHDC3Q96DC8 AL353997.1-201ENST00000432936 108 ntBASIC0.45□□□□□ -2.34
ECHDC3Q96DC8 AF235103.2-201ENST00000525753 346 ntBASIC0.45□□□□□ -2.34
ECHDC3Q96DC8 AC004467.1-201ENST00000615678 330 ntBASIC0.45□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.393-201ENST00000383936 102 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 RNU6-1067P-201ENST00000384752 107 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.573-201ENST00000384763 105 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 RNU2-61P-201ENST00000411069 191 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 AC092423.1-201ENST00000430165 186 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 AC011352.1-201ENST00000512300 793 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 SNORD45.4-201ENST00000516629 73 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.708-201ENST00000516950 96 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 AC022616.4-201ENST00000522985 181 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 RNU6-94P-201ENST00000607728 107 ntBASIC0.44□□□□□ -2.34
ECHDC3Q96DC8 SNORD114-23-201ENST00000363536 72 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.172-201ENST00000363765 102 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 RNU6-961P-201ENST00000363893 105 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 AL031003.1-201ENST00000404229 172 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 MIR1827-201ENST00000408549 66 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 MRPS18CP6-201ENST00000423587 223 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 SNORD123-201ENST00000459473 70 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 SNORA18.7-201ENST00000516910 131 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 AC060780.3-201ENST00000589464 80 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 AC240442.1-201ENST00000616055 283 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 U4.5-201ENST00000617137 123 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 MIR3688-2-201ENST00000636963 87 ntBASIC0.43□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.101-201ENST00000363154 102 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 SNORD113.3-201ENST00000364630 78 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.404-201ENST00000383978 102 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.621-201ENST00000411065 96 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 MTND1P4-201ENST00000435196 415 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 AC116353.2-201ENST00000505332 712 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 AC105313.1-201ENST00000509121 353 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 RNU6-408P-201ENST00000515910 100 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 RNU6-720P-201ENST00000516363 108 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 AC090517.2-201ENST00000614966 680 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 MIR6516-201ENST00000630554 81 ntBASIC0.42□□□□□ -2.34
ECHDC3Q96DC8 AC134026.1-201ENST00000623249 2239 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 SNORD50B-201ENST00000364995 70 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.482-201ENST00000384377 111 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RNU6-510P-201ENST00000391239 108 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 MIR548F5-201ENST00000408421 86 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RNU2-54P-201ENST00000410299 190 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RNU6-1199P-201ENST00000411249 104 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RNU6-1304P-201ENST00000411374 106 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RPS3AP52-201ENST00000435639 297 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 HMGN2P32-201ENST00000444648 269 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RPL7P42-201ENST00000481005 679 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RPL17P19-201ENST00000489069 552 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 RNU6-1012P-201ENST00000516606 109 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 AC005899.2-201ENST00000584353 90 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 AC092794.2-201ENST00000620933 563 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 AL589743.1-201ENST00000551932 2712 ntBASIC0.41□□□□□ -2.34
ECHDC3Q96DC8 SNORD114-26-201ENST00000363543 72 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 RNU6-654P-201ENST00000364373 107 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 MIR193B-201ENST00000384907 83 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 RNU6-613P-201ENST00000410412 108 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 MTND3P10-201ENST00000450967 341 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 AC067940.1-201ENST00000458411 300 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 U8.19-201ENST00000459095 133 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.4□□□□□ -2.35
ECHDC3Q96DC8 snoU2-30.1-201ENST00000365012 70 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 RNU6-601P-201ENST00000384540 107 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 MIR7-2-201ENST00000384970 110 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 SNORD105-201ENST00000386910 85 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 MTND3P8-201ENST00000412909 339 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 AL390729.2-201ENST00000416137 156 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 MTND4P28-201ENST00000426217 387 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 AC011195.1-201ENST00000578177 177 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 AC005972.2-201ENST00000604690 348 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 RBM11P1-201ENST00000604951 799 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 MIR1244-1-201ENST00000612829 85 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 AC087588.2-201ENST00000617667 426 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 AC008133.2-201ENST00000624540 351 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 MIR1244-3-201ENST00000635744 85 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 MIR1244-2-201ENST00000636449 85 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 MIR1244-4-202ENST00000636813 85 ntBASIC0.39□□□□□ -2.35
ECHDC3Q96DC8 RNU6-1084P-201ENST00000362498 107 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 RNU6-369P-201ENST00000362515 102 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 SNORA72-201ENST00000384339 132 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 RNU6-177P-201ENST00000411257 104 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 RNU6-436P-201ENST00000516171 114 ntBASIC0.38□□□□□ -2.35
ECHDC3Q96DC8 AC006380.1-201ENST00000603598 186 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms