Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR3162-201ENST00000581818 82 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 AC046143.2-201ENST00000609789 160 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 MIR6079-201ENST00000635807 62 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 ZNF271P-202ENST00000465539 1970 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 AC016717.2-201ENST00000609089 5141 ntBASIC2.79□□□□□ -1.96
BRF1Q92994 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
BRF1Q92994 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
BRF1Q92994 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRF1Q92994 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.78□□□□□ -1.96
BRF1Q92994 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 Y_RNA.218-201ENST00000364218 104 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 SNORA25.7-201ENST00000364375 127 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 RNU6-460P-201ENST00000391158 108 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 RNU2-70P-201ENST00000410718 179 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 MTATP6P29-201ENST00000415057 132 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.78□□□□□ -1.96
BRF1Q92994 HMGN1P7-201ENST00000491722 313 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 AC234781.5-201ENST00000508429 271 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 RNU7-149P-201ENST00000516739 59 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 CYCSP26-201ENST00000534107 320 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
BRF1Q92994 Pinc.1-201ENST00000616452 154 ntBASIC2.78□□□□□ -1.96
BRF1Q92994 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRF1Q92994 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
BRF1Q92994 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.77□□□□□ -1.97
BRF1Q92994 Y_RNA.127-201ENST00000363386 109 ntBASIC2.77□□□□□ -1.97
BRF1Q92994 RNY1P11-201ENST00000363759 113 ntBASIC2.77□□□□□ -1.97
BRF1Q92994 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.77□□□□□ -1.97
BRF1Q92994 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.77□□□□□ -1.97
BRF1Q92994 RNU7-94P-201ENST00000459576 63 ntBASIC2.77□□□□□ -1.97
BRF1Q92994 AP001328.1-201ENST00000528550 176 ntBASIC2.77□□□□□ -1.97
BRF1Q92994 AC006023.1-201ENST00000603944 259 ntBASIC2.77□□□□□ -1.97
BRF1Q92994 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
BRF1Q92994 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BRF1Q92994 Y_RNA.71-201ENST00000362892 104 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 RNU6-1290P-201ENST00000362957 109 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 Y_RNA.91-201ENST00000363042 107 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 RNA5SP493-201ENST00000364115 91 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 Y_RNA.253-201ENST00000364562 112 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 RNA5SP205-201ENST00000364653 136 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 SNORD116-14-201ENST00000383894 92 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 SNORD116-17-201ENST00000383929 92 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 SNORD116-15-201ENST00000384445 92 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 Y_RNA.510-201ENST00000384511 114 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 SNORD116-19-201ENST00000384729 92 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.76□□□□□ -1.97
BRF1Q92994 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.76□□□□□ -1.97
BRF1Q92994 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 RNU6-1211P-201ENST00000459179 105 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 NDUFA4P2-201ENST00000489989 244 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 YWHAEP4-201ENST00000505390 198 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 RNU6-1291P-201ENST00000516591 104 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 RNA5SP402-201ENST00000517148 110 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 MIR3169-201ENST00000578032 83 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 U7.2-201ENST00000607576 63 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 FO624990.1-201ENST00000636373 85 ntBASIC2.76□□□□□ -1.97
BRF1Q92994 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
BRF1Q92994 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRF1Q92994 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
BRF1Q92994 RNU6-1164P-201ENST00000364428 107 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 SNORD50B-201ENST00000364995 70 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 RNU6-80P-201ENST00000384195 107 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 MIR29C-201ENST00000385231 88 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 Y_RNA.584-201ENST00000391090 114 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 Y_RNA.621-201ENST00000411065 96 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF1Q92994 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF1Q92994 AC233266.1-201ENST00000454518 96 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 AC090142.3-201ENST00000519012 385 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 MIR4446-201ENST00000578505 67 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.75□□□□□ -1.97
BRF1Q92994 AC242852.1-201ENST00000612151 96 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 AC244015.1-201ENST00000622301 99 ntBASIC2.75□□□□□ -1.97
BRF1Q92994 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
BRF1Q92994 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRF1Q92994 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BRF1Q92994 SNORA33-201ENST00000363664 130 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 SNORD114-30-201ENST00000364448 72 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 Y_RNA.486-201ENST00000384398 107 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 RNU6-735P-201ENST00000410612 107 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 Y_RNA.629-201ENST00000411368 105 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.74□□□□□ -1.97
BRF1Q92994 AC087685.1-201ENST00000587507 141 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 RPL12P50-201ENST00000603116 116 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 CTSLP2-204ENST00000629029 392 ntBASIC2.74□□□□□ -1.97
BRF1Q92994 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.74□□□□□ -1.97
BRF1Q92994 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
BRF1Q92994 RNA5SP289-201ENST00000362332 137 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 SNORA8-201ENST00000384574 139 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 RNA5SP323-201ENST00000391094 133 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 SNRPGP10-201ENST00000432323 225 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 AL513328.1-201ENST00000446460 224 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.73□□□□□ -1.97
BRF1Q92994 SNORA31.15-201ENST00000516771 132 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 RNU2-56P-201ENST00000516826 190 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 AP002004.2-201ENST00000531656 154 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 MIR4672-201ENST00000583126 81 ntBASIC2.73□□□□□ -1.97
BRF1Q92994 AC011603.4-201ENST00000611325 277 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms