Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
ERCC4Q92889 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
ERCC4Q92889 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
ERCC4Q92889 Y_RNA.203-201ENST00000364106 102 ntBASIC2.55□□□□□ -2
ERCC4Q92889 RNA5SP37-201ENST00000365420 130 ntBASIC2.55□□□□□ -2
ERCC4Q92889 RNU6-449P-201ENST00000383914 107 ntBASIC2.55□□□□□ -2
ERCC4Q92889 SNORD116-18-201ENST00000383961 92 ntBASIC2.55□□□□□ -2
ERCC4Q92889 RNU6-301P-201ENST00000384277 107 ntBASIC2.55□□□□□ -2
ERCC4Q92889 MIR515-2-201ENST00000384883 83 ntBASIC2.55□□□□□ -2
ERCC4Q92889 MIR515-1-201ENST00000384884 83 ntBASIC2.55□□□□□ -2
ERCC4Q92889 RNU6-1186P-201ENST00000410429 97 ntBASIC2.55□□□□□ -2
ERCC4Q92889 CST2P1-201ENST00000425770 87 ntBASIC2.55□□□□□ -2
ERCC4Q92889 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.55□□□□□ -2
ERCC4Q92889 RPS27P21-201ENST00000486977 252 ntBASIC2.55□□□□□ -2
ERCC4Q92889 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
ERCC4Q92889 RNU6-1096P-201ENST00000517089 102 ntBASIC2.55□□□□□ -2
ERCC4Q92889 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
ERCC4Q92889 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.54□□□□□ -2
ERCC4Q92889 SNORA3A-201ENST00000364113 130 ntBASIC2.54□□□□□ -2
ERCC4Q92889 Y_RNA.796-201ENST00000364268 102 ntBASIC2.54□□□□□ -2
ERCC4Q92889 Y_RNA.799-201ENST00000364992 102 ntBASIC2.54□□□□□ -2
ERCC4Q92889 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
ERCC4Q92889 MIR15B-201ENST00000385045 98 ntBASIC2.54□□□□□ -2
ERCC4Q92889 MIR29C-201ENST00000385231 88 ntBASIC2.54□□□□□ -2
ERCC4Q92889 MIR613-201ENST00000385248 95 ntBASIC2.54□□□□□ -2
ERCC4Q92889 AC099677.2-201ENST00000436385 175 ntBASIC2.54□□□□□ -2
ERCC4Q92889 SNORD11-201ENST00000459124 84 ntBASIC2.54□□□□□ -2
ERCC4Q92889 AC104435.1-201ENST00000483483 166 ntBASIC2.54□□□□□ -2
ERCC4Q92889 RPS29P21-201ENST00000496272 170 ntBASIC2.54□□□□□ -2
ERCC4Q92889 YWHAEP4-201ENST00000505390 198 ntBASIC2.54□□□□□ -2
ERCC4Q92889 RNA5SP137-201ENST00000516833 135 ntBASIC2.54□□□□□ -2
ERCC4Q92889 AC024995.1-201ENST00000523014 93 ntBASIC2.54□□□□□ -2
ERCC4Q92889 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERCC4Q92889 RNU4-41P-201ENST00000364426 143 ntBASIC2.53□□□□□ -2
ERCC4Q92889 RNU6-728P-201ENST00000365375 104 ntBASIC2.53□□□□□ -2
ERCC4Q92889 Y_RNA.400-201ENST00000383963 111 ntBASIC2.53□□□□□ -2
ERCC4Q92889 RNU6-643P-201ENST00000384018 107 ntBASIC2.53□□□□□ -2
ERCC4Q92889 RNU4-52P-201ENST00000384209 138 ntBASIC2.53□□□□□ -2
ERCC4Q92889 RNU11-5P-201ENST00000391216 129 ntBASIC2.53□□□□□ -2
ERCC4Q92889 AL512604.1-201ENST00000404812 257 ntBASIC2.53□□□□□ -2
ERCC4Q92889 AC107027.2-201ENST00000512197 115 ntBASIC2.53□□□□□ -2
ERCC4Q92889 AL358944.1-201ENST00000528537 144 ntBASIC2.53□□□□□ -2
ERCC4Q92889 MIR2681-201ENST00000581814 105 ntBASIC2.53□□□□□ -2
ERCC4Q92889 AC018630.2-201ENST00000534866 2403 ntBASIC2.53□□□□□ -2
ERCC4Q92889 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
ERCC4Q92889 RNU6-704P-201ENST00000364162 103 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 RNU2-55P-201ENST00000411146 174 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 RNA5SP270-201ENST00000411361 118 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.52□□□□□ -2.01
ERCC4Q92889 SNRPGP8-201ENST00000454064 226 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 RNU1-142P-201ENST00000516682 145 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 MIR514B-201ENST00000516774 80 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 RNU6-341P-201ENST00000516973 96 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 MIR6079-201ENST00000635807 62 ntBASIC2.52□□□□□ -2.01
ERCC4Q92889 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.51□□□□□ -2.01
ERCC4Q92889 AL157777.2-201ENST00000258070 137 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 RNU1-58P-201ENST00000362413 163 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 RNU6-862P-201ENST00000362804 105 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 RNU6-23P-201ENST00000363283 107 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 RNU6-1209P-201ENST00000363655 107 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 SNORD45.3-201ENST00000363836 72 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 SNORD113-1-201ENST00000365321 69 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 RNU6-484P-201ENST00000384016 107 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 MIR562-201ENST00000384894 95 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 AL121914.1-201ENST00000450188 156 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 AL160236.1-201ENST00000556317 195 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.51□□□□□ -2.01
ERCC4Q92889 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 Y_RNA.778-201ENST00000620203 90 ntBASIC2.51□□□□□ -2.01
ERCC4Q92889 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ERCC4Q92889 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.5□□□□□ -2.01
ERCC4Q92889 AL359851.1-201ENST00000569460 4997 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 RNU6-818P-201ENST00000364837 108 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 RNA5SP126-201ENST00000365092 109 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 RNA5SP508-201ENST00000411327 119 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.5□□□□□ -2.01
ERCC4Q92889 RN7SL429P-201ENST00000479090 223 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 RN7SL489P-201ENST00000486185 223 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 RN7SL327P-201ENST00000488659 223 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.5□□□□□ -2.01
ERCC4Q92889 AC005786.1-201ENST00000588553 154 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 RN7SL853P-201ENST00000617250 223 ntBASIC2.5□□□□□ -2.01
ERCC4Q92889 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ERCC4Q92889 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ERCC4Q92889 MIR221-201ENST00000385135 110 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 Y_RNA.587-201ENST00000391210 103 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 MIR1283-2-201ENST00000408621 87 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 TMSB4XP3-201ENST00000445144 114 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.49□□□□□ -2.01
ERCC4Q92889 AL163195.1-201ENST00000496941 348 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 SNORD77.4-201ENST00000516158 81 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 RNA5SP281-201ENST00000516504 135 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 SNORD116-25-201ENST00000516517 92 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 RPL23AP91-201ENST00000569211 455 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 MIR5002-201ENST00000584713 97 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 DNAJC19P2-201ENST00000593340 302 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 uc_338.4-201ENST00000616635 176 ntBASIC2.49□□□□□ -2.01
ERCC4Q92889 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ERCC4Q92889 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms