Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SNORA12.1-201ENST00000390873 148 ntBASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 BTF3P11-201ENST00000426582 477 ntBASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 OR9P1P-201ENST00000496431 281 ntBASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 U2.14-201ENST00000615943 113 ntBASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 AC095038.3-201ENST00000634439 195 ntBASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RAB40AQ8WXH6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 RNU4-41P-201ENST00000364426 143 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 PGBD4P5-201ENST00000445958 426 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 snoU13.9-201ENST00000458927 103 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 AC005908.1-201ENST00000468701 347 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 MIR5089-201ENST00000580047 84 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 AL513423.1-201ENST00000621695 132 ntBASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB40AQ8WXH6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 SNORD68-201ENST00000363214 84 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 MIR194-1-201ENST00000384892 85 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 snosnR66.1-201ENST00000391095 99 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 AC019129.1-201ENST00000403786 261 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 SNORA36B-201ENST00000410438 131 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 AC004965.1-201ENST00000413033 213 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 AL161935.2-201ENST00000414627 60 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 SNORA77B-201ENST00000578179 125 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 AC005357.1-201ENST00000588399 301 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 AC013791.1-201ENST00000616619 62 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 AL591926.4-201ENST00000616895 298 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 U4.1-201ENST00000620349 87 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 MIR7843-201ENST00000622274 79 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 ICE2P2-201ENST00000483823 2787 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
RAB40AQ8WXH6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RNU6-424P-201ENST00000384367 105 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RNU2-38P-201ENST00000410856 79 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 AL139156.1-201ENST00000412785 841 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RPL30P13-201ENST00000418873 348 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 CALM2P4-201ENST00000430810 426 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 Z98949.2-201ENST00000440996 144 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RNU6-437P-201ENST00000459408 95 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 HMGN1P7-201ENST00000491722 313 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 RNA5SP168-201ENST00000516642 112 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.783-201ENST00000613546 102 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 MIR8063-201ENST00000621930 81 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 SNORD3E-202ENST00000627253 216 ntBASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.67□□□□□ -2.14
RAB40AQ8WXH6 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 MIR660-201ENST00000385235 97 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 U8.16-201ENST00000391279 133 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 MIR1289-2-201ENST00000408360 111 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 SNORD127-201ENST00000458892 86 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 MIR5692C2-201ENST00000577959 77 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 AC012433.1-201ENST00000588916 398 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 JPX_2.1-201ENST00000614161 69 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 7SK.10-201ENST00000621414 298 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 snoU18.1-201ENST00000629629 71 ntBASIC1.66□□□□□ -2.14
RAB40AQ8WXH6 Y_RNA.144-201ENST00000363521 113 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 RNU6-740P-201ENST00000364734 105 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 RNU6-702P-201ENST00000364982 107 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 RNU6-144P-201ENST00000383951 107 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 MIR513A1-201ENST00000385138 129 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 MIR548H3-201ENST00000408771 118 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 RNU2-2P-201ENST00000410396 191 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 MLLT10P1-201ENST00000418346 262 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 RPL39P38-201ENST00000467018 153 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 Y_RNA.668-201ENST00000516233 93 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 DEFB122-202ENST00000569013 197 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 MIR3124-201ENST00000582636 67 ntBASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.65□□□□□ -2.15
RAB40AQ8WXH6 Y_RNA.14-201ENST00000362415 103 ntBASIC1.64□□□□□ -2.15
RAB40AQ8WXH6 Y_RNA.54-201ENST00000362766 105 ntBASIC1.64□□□□□ -2.15
RAB40AQ8WXH6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.64□□□□□ -2.15
RAB40AQ8WXH6 Y_RNA.293-201ENST00000364908 93 ntBASIC1.64□□□□□ -2.15
RAB40AQ8WXH6 RNA5SP259-201ENST00000365541 109 ntBASIC1.64□□□□□ -2.15
RAB40AQ8WXH6 SNRPGP10-201ENST00000432323 225 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms