Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MIR1298-201ENST00000408783 112 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AL390729.2-201ENST00000416137 156 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 MLLT10P1-201ENST00000418346 262 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AF228730.4-201ENST00000421457 183 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SNRPGP10-201ENST00000432323 225 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 RPS20P10-201ENST00000451209 253 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SUMO1P2-201ENST00000452524 304 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 RNU7-152P-201ENST00000458982 64 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD19B-201ENST00000459623 84 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 CYCTP-201ENST00000504253 315 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD79.1-201ENST00000516069 84 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD111.1-201ENST00000516421 86 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 RNU4-77P-201ENST00000516692 156 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AC006380.1-201ENST00000603598 186 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AC022441.3-201ENST00000605737 136 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AC091925.1-201ENST00000623204 462 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.5-201ENST00000362334 102 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.813-201ENST00000364639 102 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.570-201ENST00000384750 101 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 MIR522-201ENST00000385071 87 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 RNU11-5P-201ENST00000391216 129 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 AC099799.1-201ENST00000439809 192 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-322P-201ENST00000516010 103 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 MIR4698-201ENST00000577795 80 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 MIR3145-201ENST00000580727 82 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 MIR4661-201ENST00000582720 75 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 MIR5188-201ENST00000583467 113 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 VN1R91P-201ENST00000594377 169 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 DEFB117-201ENST00000602356 141 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 AC092447.9-201ENST00000603395 144 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD58B-201ENST00000607313 66 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 MIR6767-201ENST00000637302 66 ntBASIC0.67□□□□□ -2.3
RTN4IP1Q8WWV3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 U8.5-201ENST00000364528 136 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.315-201ENST00000365117 102 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.356-201ENST00000365475 113 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.384-201ENST00000383909 102 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 AC063976.4-201ENST00000421971 163 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 FGF7P4-201ENST00000509595 295 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 SNORA31.4-201ENST00000516049 129 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 SNORA70.12-201ENST00000516084 153 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD116.3-201ENST00000517176 78 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 MIR4423-201ENST00000580922 80 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 MIR4781-201ENST00000585250 76 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 MIR4762-201ENST00000585261 75 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 AC133104.2-201ENST00000615272 193 ntBASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.66□□□□□ -2.3
RTN4IP1Q8WWV3 MIR96-201ENST00000362288 78 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 SNORA25.3-201ENST00000363205 127 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.187-201ENST00000363918 113 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 SNORD50B-201ENST00000364995 70 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 RNY3P14-201ENST00000384309 102 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 MIR19B1-201ENST00000384829 87 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 RNU4-30P-201ENST00000410245 143 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-855P-201ENST00000410395 104 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 MCFD2P1-201ENST00000417812 300 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 MTCO2P27-201ENST00000420740 428 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 RNU7-41P-201ENST00000515917 61 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-911P-201ENST00000516523 104 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 RN7SKP295-201ENST00000517264 153 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 AC090142.3-201ENST00000519012 385 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 AC005972.2-201ENST00000604690 348 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 AL391903.3-201ENST00000612158 163 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 AC027279.3-201ENST00000625055 122 ntBASIC0.65□□□□□ -2.31
RTN4IP1Q8WWV3 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.230-201ENST00000364348 109 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 RNU1-36P-201ENST00000365130 165 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-937P-201ENST00000384325 106 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 POLR2J4-204ENST00000418424 324 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 LINC01399-202ENST00000458450 244 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 SNORD45.4-201ENST00000516629 73 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 SNORA18.7-201ENST00000516910 131 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 AL357312.1-201ENST00000603879 298 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 AC108706.1-201ENST00000611053 297 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 PART1_1.1-201ENST00000611761 217 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
RTN4IP1Q8WWV3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.63□□□□□ -2.31
RTN4IP1Q8WWV3 RNU1-93P-201ENST00000364704 169 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 239.1 ms