Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SNORA24-201ENST00000384096 131 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-606P-201ENST00000384721 111 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 MT-TQ-201ENST00000387372 72 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 SNORA3B-201ENST00000391305 131 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 AC073464.1-201ENST00000429823 534 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 Z82188.1-201ENST00000436709 154 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-475P-201ENST00000516073 104 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 AL137161.1-201ENST00000532231 390 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 UBL5P4-201ENST00000562584 236 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 AL355297.3-201ENST00000604082 446 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 AL049777.1-201ENST00000622740 518 ntBASIC-1.07□□□□□ -2.58
SPTSSBQ8NFR3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 SNORD50.1-201ENST00000362987 71 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.112-201ENST00000363250 102 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.796-201ENST00000364268 102 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.799-201ENST00000364992 102 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 SSR1P2-201ENST00000415208 787 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 MTATP6P26-201ENST00000445926 662 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 RNU7-181P-201ENST00000517234 74 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 AC022616.4-201ENST00000522985 181 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 AC022878.1-201ENST00000530684 149 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 AC010205.1-201ENST00000616668 449 ntBASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.08□□□□□ -2.58
SPTSSBQ8NFR3 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 SNORA22B-201ENST00000383876 138 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 RNU6-157P-201ENST00000383957 107 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 SNORD38B-201ENST00000384690 67 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 RNU4-83P-201ENST00000410863 133 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 AC010424.1-201ENST00000506336 297 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 LRRC34P1-201ENST00000542742 915 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 AL133173.2-201ENST00000614270 90 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 AL158063.1-201ENST00000615349 536 ntBASIC-1.09□□□□□ -2.58
SPTSSBQ8NFR3 MIR410-201ENST00000362222 80 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 RNU4-73P-201ENST00000363164 141 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 SNORD14E-201ENST00000364009 85 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 MIR1-2-201ENST00000384961 85 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 MIR196A1-201ENST00000388006 70 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 RNU2-29P-201ENST00000410423 189 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 U8.19-201ENST00000459095 133 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 U8.22-201ENST00000459141 133 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-765P-201ENST00000516916 99 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 AC105029.1-201ENST00000520250 669 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 MIR4802-201ENST00000581881 80 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 POLR3GP1-201ENST00000594073 261 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 AC069431.2-201ENST00000604149 1099 ntBASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.1□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-501P-201ENST00000364072 100 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-726P-201ENST00000364680 107 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 SNORA1-201ENST00000384107 130 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-325P-201ENST00000411132 105 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 AC104576.1-201ENST00000524225 88 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 AC245008.1-201ENST00000608123 476 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 Z97988.1-201ENST00000637697 135 ntBASIC-1.11□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-291P-201ENST00000384720 107 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 RNY1P7-201ENST00000384743 110 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 MIR521-1-201ENST00000384902 87 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 UQCRBP2-201ENST00000447827 297 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 AL157687.1-201ENST00000554853 619 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 AC087685.1-201ENST00000587507 141 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 AP001330.5-201ENST00000607176 411 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 AC006566.1-201ENST00000608943 513 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 AC072046.2-201ENST00000618366 268 ntBASIC-1.12□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 MIR1912-201ENST00000410389 80 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 AL031667.1-201ENST00000440222 725 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 RPL30P10-201ENST00000488148 337 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 RNA5SP66-201ENST00000517178 101 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 MIR5583-1-201ENST00000580941 59 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 AC063944.3-201ENST00000609969 533 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 MIR8055-201ENST00000610739 97 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 MIR6082-201ENST00000613604 109 ntBASIC-1.13□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-268P-201ENST00000364174 107 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 AL590002.1-201ENST00000406554 418 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 SNORD93-201ENST00000408813 74 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 RPL7P42-201ENST00000481005 679 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 AP000811.1-201ENST00000603803 651 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 AL607023.1-201ENST00000620045 248 ntBASIC-1.14□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-442P-201ENST00000383968 104 ntBASIC-1.15□□□□□ -2.59
SPTSSBQ8NFR3 RNU6-541P-201ENST00000384709 110 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 470.3 ms