Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AL929325.1-201ENST00000603096 117 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 AL353997.5-201ENST00000618886 171 ntBASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PRPF38AQ8NAV1 SNORA40.18-201ENST00000391200 128 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 RNU7-141P-201ENST00000459304 62 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 RPL39P38-201ENST00000467018 153 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.668-201ENST00000516233 93 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 AC024405.2-202ENST00000532731 184 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 MIR4503-201ENST00000582187 83 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 MIR3149-201ENST00000584629 83 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 MIR8074-201ENST00000615081 81 ntBASIC2.26□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.217-201ENST00000364214 105 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 U8.7-201ENST00000364940 136 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-144P-201ENST00000383951 107 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 MIR1267-201ENST00000408723 78 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 RPL30P13-201ENST00000418873 348 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 CYCSP49-201ENST00000420810 319 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 AL445685.2-201ENST00000422551 342 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 JTBP1-201ENST00000441314 247 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 STAG3L5P-204ENST00000443759 179 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-1132P-201ENST00000459214 107 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.638-201ENST00000459374 113 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.641-201ENST00000459414 105 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 AC117454.1-201ENST00000491120 168 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 RPL23AP54-201ENST00000495129 419 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 MIR3935-201ENST00000583472 104 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 SNRPGP19-201ENST00000603826 189 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.25□□□□□ -2.05
PRPF38AQ8NAV1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-662P-201ENST00000384253 104 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 MIR30A-201ENST00000385092 71 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-763P-201ENST00000390865 106 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 SNORA26.5-201ENST00000391215 123 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 MTCO2P33-201ENST00000402100 465 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 AL021397.1-201ENST00000451806 248 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 AC025033.1-201ENST00000463883 194 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 MIR2681-201ENST00000581814 105 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 AC062037.2-201ENST00000610137 73 ntBASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.14-201ENST00000362415 103 ntBASIC2.23□□□□□ -2.05
PRPF38AQ8NAV1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF38AQ8NAV1 BTF3P11-201ENST00000426582 477 ntBASIC2.23□□□□□ -2.05
PRPF38AQ8NAV1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.23□□□□□ -2.05
PRPF38AQ8NAV1 MIR3198-2-201ENST00000577868 80 ntBASIC2.23□□□□□ -2.05
PRPF38AQ8NAV1 AC013791.1-201ENST00000616619 62 ntBASIC2.23□□□□□ -2.05
PRPF38AQ8NAV1 AC073349.3-201ENST00000617616 186 ntBASIC2.23□□□□□ -2.05
PRPF38AQ8NAV1 MIR424-201ENST00000362227 98 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-1205P-201ENST00000363625 106 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-1080P-201ENST00000383982 107 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 Y_RNA.478-201ENST00000384358 107 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-1289P-201ENST00000384431 106 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 SNORA36B-201ENST00000410438 131 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 RNU2-38P-201ENST00000410856 79 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 RNA5SP489-201ENST00000410986 109 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 PGBD4P5-201ENST00000445958 426 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 AC005908.1-201ENST00000468701 347 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 AC099513.1-201ENST00000490423 301 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 AC012433.1-201ENST00000588916 398 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 AC095038.3-201ENST00000634439 195 ntBASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PRPF38AQ8NAV1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
PRPF38AQ8NAV1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
PRPF38AQ8NAV1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 RNU6-1048P-201ENST00000364054 107 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.350-201ENST00000365409 98 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 RNU6-203P-201ENST00000384038 104 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.562-201ENST00000384695 113 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 SNORA12.1-201ENST00000390873 148 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 RNU2-14P-201ENST00000411053 191 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 RNU6-437P-201ENST00000459408 95 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.637-201ENST00000459424 114 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 MIR5692C2-201ENST00000577959 77 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 BX284668.6-201ENST00000606899 438 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 AC021506.2-201ENST00000612354 169 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 AL513423.1-201ENST00000621695 132 ntBASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
PRPF38AQ8NAV1 RNU6-674P-201ENST00000363831 107 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 Y_RNA.590-201ENST00000410140 107 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 HMGN1P7-201ENST00000491722 313 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 snoU18.1-201ENST00000629629 71 ntBASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
PRPF38AQ8NAV1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PRPF38AQ8NAV1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms