Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC104389.3-201ENST00000445629 235 ntBASIC3.3□□□□□ -1.88
SIX5Q8N196 MIR3162-201ENST00000581818 82 ntBASIC3.3□□□□□ -1.88
SIX5Q8N196 AC134878.1-201ENST00000619901 243 ntBASIC3.3□□□□□ -1.88
SIX5Q8N196 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SIX5Q8N196 ICE2P2-201ENST00000483823 2787 ntBASIC3.3□□□□□ -1.88
SIX5Q8N196 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SIX5Q8N196 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
SIX5Q8N196 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIX5Q8N196 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SIX5Q8N196 MIRLET7F2-201ENST00000385277 83 ntBASIC3.29□□□□□ -1.88
SIX5Q8N196 RNA5SP482-201ENST00000391269 118 ntBASIC3.29□□□□□ -1.88
SIX5Q8N196 AC092427.1-202ENST00000430569 476 ntBASIC3.29□□□□□ -1.88
SIX5Q8N196 AC022018.1-201ENST00000430685 241 ntBASIC3.29□□□□□ -1.88
SIX5Q8N196 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX5Q8N196 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.29□□□□□ -1.88
SIX5Q8N196 MIR3169-201ENST00000578032 83 ntBASIC3.29□□□□□ -1.88
SIX5Q8N196 MIR5197-201ENST00000583721 112 ntBASIC3.29□□□□□ -1.88
SIX5Q8N196 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.29□□□□□ -1.88
SIX5Q8N196 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIX5Q8N196 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
SIX5Q8N196 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIX5Q8N196 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SIX5Q8N196 AC068647.1-201ENST00000489539 2265 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SIX5Q8N196 U8.5-201ENST00000364528 136 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 Y_RNA.410-201ENST00000383992 113 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 Y_RNA.528-201ENST00000384575 108 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 RNA5SP293-201ENST00000410527 113 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.28□□□□□ -1.88
SIX5Q8N196 RNU7-70P-201ENST00000516941 66 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 MIR4762-201ENST00000585261 75 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.28□□□□□ -1.88
SIX5Q8N196 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.28□□□□□ -1.88
SIX5Q8N196 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIX5Q8N196 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIX5Q8N196 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIX5Q8N196 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIX5Q8N196 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIX5Q8N196 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIX5Q8N196 RNU1-70P-201ENST00000362618 164 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 SNORA71.1-201ENST00000364523 117 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 RNU1-91P-201ENST00000364746 163 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 MIR29C-201ENST00000385231 88 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 EEF1A1P41-201ENST00000414667 207 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 AC010401.1-201ENST00000463867 348 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 SNORA70.19-201ENST00000516717 90 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 RNU7-28P-201ENST00000516759 62 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 AC006441.5-201ENST00000612680 209 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SIX5Q8N196 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
SIX5Q8N196 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SIX5Q8N196 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIX5Q8N196 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIX5Q8N196 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX5Q8N196 SNORD115-28-201ENST00000363931 81 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 RNU6-1164P-201ENST00000364428 107 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 RNU6-1189P-201ENST00000383958 107 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 RNA5SP136-201ENST00000410906 107 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX5Q8N196 AC099677.2-201ENST00000436385 175 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 HMGN2P32-201ENST00000444648 269 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 RPL23AP67-201ENST00000465341 474 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 RNU7-25P-201ENST00000516544 62 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 SNORD45.4-201ENST00000516629 73 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 MIR3613-201ENST00000579844 87 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 AL137067.1-201ENST00000615933 120 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIX5Q8N196 AC009487.2-201ENST00000420969 6821 ntBASIC3.26□□□□□ -1.89
SIX5Q8N196 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIX5Q8N196 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SIX5Q8N196 Y_RNA.336-201ENST00000365307 109 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 SNORA2.2-201ENST00000365473 135 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX5Q8N196 RNU6-412P-201ENST00000516434 106 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 SCARNA15-202ENST00000516881 127 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 IGKV1-22-201ENST00000524313 326 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 MIR3126-201ENST00000577443 74 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 MIR4679-2-201ENST00000578358 77 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 AC005786.1-201ENST00000588553 154 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 AC069114.2-201ENST00000604699 304 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 uc_338.1-201ENST00000612113 180 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIX5Q8N196 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
SIX5Q8N196 AC008555.8-201ENST00000623602 2168 ntBASIC3.25□□□□□ -1.89
SIX5Q8N196 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SIX5Q8N196 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX5Q8N196 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX5Q8N196 MAPK10-266ENST00000641066 6555 ntBASIC3.24□□□□□ -1.89
SIX5Q8N196 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
SIX5Q8N196 RNU6-147P-201ENST00000383983 107 ntBASIC3.24□□□□□ -1.89
SIX5Q8N196 SNORA80E-201ENST00000384744 137 ntBASIC3.24□□□□□ -1.89
SIX5Q8N196 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX5Q8N196 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX5Q8N196 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms