Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNORA1B-201ENST00000362535 133 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 RNU6-915P-201ENST00000364943 103 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.584-201ENST00000391090 114 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 RNU6-735P-201ENST00000410612 107 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.55□□□□□ -2
TRIM48Q8IWZ4 AC008267.6-201ENST00000441664 139 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.55□□□□□ -2
TRIM48Q8IWZ4 RPL23AP94-201ENST00000512518 302 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 RNU6-1333P-201ENST00000516162 93 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 TUG1_4.1-201ENST00000619464 181 ntBASIC2.55□□□□□ -2
TRIM48Q8IWZ4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 MIR449A-201ENST00000362113 91 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.294-201ENST00000364916 102 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 SNORD72-201ENST00000390994 80 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 MRPS17P9-201ENST00000511924 393 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 AL160236.1-201ENST00000556317 195 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 AC026271.5-201ENST00000577873 130 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 AL591926.4-201ENST00000616895 298 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.54□□□□□ -2
TRIM48Q8IWZ4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRIM48Q8IWZ4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM48Q8IWZ4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM48Q8IWZ4 ICE2P2-201ENST00000483823 2787 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 MIR539-201ENST00000365690 78 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 RN7SKP284-201ENST00000411002 343 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 BX510359.4-201ENST00000423750 193 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 CST2P1-201ENST00000425770 87 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 AL606517.2-201ENST00000442855 241 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 AL049830.1-201ENST00000468034 425 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 Y_RNA.686-201ENST00000516548 134 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 AL449363.1-201ENST00000617815 186 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.53□□□□□ -2
TRIM48Q8IWZ4 AP001340.1-201ENST00000624405 217 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 AC022513.1-201ENST00000624512 117 ntBASIC2.53□□□□□ -2
TRIM48Q8IWZ4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRIM48Q8IWZ4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
TRIM48Q8IWZ4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 U8.1-201ENST00000362843 134 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 Y_RNA.127-201ENST00000363386 109 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RNA5SP68-201ENST00000363885 119 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RNU11-5P-201ENST00000391216 129 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 AC018634.1-201ENST00000437554 401 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RPS26P45-201ENST00000471748 340 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RNU6-365P-201ENST00000517113 106 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 MIR4435-1-201ENST00000582552 80 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 AC097639.2-201ENST00000603159 172 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 AC022217.4-201ENST00000604389 163 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM48Q8IWZ4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 SNORD56.5-201ENST00000364281 72 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 SNORD116-14-201ENST00000383894 92 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 SNORD116-17-201ENST00000383929 92 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 SNORD116-15-201ENST00000384445 92 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 Y_RNA.525-201ENST00000384570 113 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 SNORD116-19-201ENST00000384729 92 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 MIR3126-201ENST00000577443 74 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
TRIM48Q8IWZ4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 SNORD68-201ENST00000363214 84 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 RNA5SP109-201ENST00000391010 116 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 RNA5SP210-201ENST00000391034 120 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 SNORA11.2-201ENST00000408318 127 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 RNU7-107P-201ENST00000459121 61 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 RNU4-57P-201ENST00000515980 135 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 Y_RNA.666-201ENST00000516187 112 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 AC024995.1-201ENST00000523014 93 ntBASIC2.5□□□□□ -2.01
TRIM48Q8IWZ4 AC007751.1-201ENST00000529260 376 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms