Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.89□□□□□ -2.11
HERC6Q8IVU3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.89□□□□□ -2.11
HERC6Q8IVU3 MIR1302-3-201ENST00000408128 138 ntBASIC1.89□□□□□ -2.11
HERC6Q8IVU3 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
HERC6Q8IVU3 SNORD127-201ENST00000458892 86 ntBASIC1.89□□□□□ -2.11
HERC6Q8IVU3 RNU7-34P-201ENST00000459394 64 ntBASIC1.89□□□□□ -2.11
HERC6Q8IVU3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.89□□□□□ -2.11
HERC6Q8IVU3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.89□□□□□ -2.11
HERC6Q8IVU3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 RNU4-13P-201ENST00000364019 141 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 RNU6-702P-201ENST00000364982 107 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 AL034345.1-201ENST00000407768 123 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 RNU2-61P-201ENST00000411069 191 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 AC008834.1-201ENST00000511612 175 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 MTND1P19-201ENST00000511780 315 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 RNU6-1338P-201ENST00000516328 91 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 RNU2-56P-201ENST00000516826 190 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 RNU6-341P-201ENST00000516973 96 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.88□□□□□ -2.11
HERC6Q8IVU3 DEFB108E-201ENST00000524692 240 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 AC022217.4-201ENST00000604389 163 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 MIR8054-201ENST00000620877 86 ntBASIC1.88□□□□□ -2.11
HERC6Q8IVU3 RNU4-90P-201ENST00000362773 141 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 RNU6-440P-201ENST00000390882 105 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 RNU6-1337P-201ENST00000516525 95 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 RNU7-28P-201ENST00000516759 62 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 AC004817.2-201ENST00000561794 651 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 MIR3145-201ENST00000580727 82 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HERC6Q8IVU3 AC012433.1-201ENST00000588916 398 ntBASIC1.87□□□□□ -2.11
HERC6Q8IVU3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 RNU6-290P-201ENST00000365212 101 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.569-201ENST00000384749 103 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 RNU2-38P-201ENST00000410856 79 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.86□□□□□ -2.11
HERC6Q8IVU3 POLR2KP2-201ENST00000438155 177 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 RPS27P1-201ENST00000450552 247 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 AP002004.2-201ENST00000531656 154 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 DEFB117-201ENST00000602356 141 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 AP000942.4-201ENST00000604811 241 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 AC062037.2-201ENST00000610137 73 ntBASIC1.86□□□□□ -2.11
HERC6Q8IVU3 AC100821.1-201ENST00000523153 2479 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 AL391987.6-201ENST00000305671 199 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 RNU6-117P-201ENST00000365415 107 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.85□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 AC004965.1-201ENST00000413033 213 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.85□□□□□ -2.11
HERC6Q8IVU3 snoU13.18-201ENST00000459483 104 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 AC091021.1-201ENST00000468051 388 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
HERC6Q8IVU3 AL358944.1-201ENST00000528537 144 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 AL929325.1-201ENST00000603096 117 ntBASIC1.85□□□□□ -2.11
HERC6Q8IVU3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HERC6Q8IVU3 MIR335-201ENST00000362173 94 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.136-201ENST00000363444 102 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 RNU6-392P-201ENST00000364926 101 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 SNORA4.2-201ENST00000365313 147 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 RNU6-136P-201ENST00000384663 107 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 MIR1276-201ENST00000408707 83 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 MTCO1P5-201ENST00000433573 344 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 AL162725.1-201ENST00000435405 301 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 AL135790.2-201ENST00000437701 267 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 AC233266.1-201ENST00000454518 96 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 U8.19-201ENST00000459095 133 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 SERF1AP1-201ENST00000514575 187 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 AC242852.1-201ENST00000612151 96 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 AC244015.1-201ENST00000622301 99 ntBASIC1.84□□□□□ -2.11
HERC6Q8IVU3 RNU4-80P-201ENST00000363200 141 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 Y_RNA.307-201ENST00000365022 117 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 RNU6-326P-201ENST00000365480 107 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 RNU6-855P-201ENST00000410395 104 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 RNA5SP511-201ENST00000410487 115 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.83□□□□□ -2.12
HERC6Q8IVU3 AL606517.2-201ENST00000442855 241 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 AC009474.2-201ENST00000451383 136 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 RNU6-63P-201ENST00000516690 95 ntBASIC1.83□□□□□ -2.12
HERC6Q8IVU3 RNU2-31P-201ENST00000516954 155 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms