Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL451046.2-201ENST00000403074 277 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 AC091826.1-201ENST00000514065 313 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 RNU1-142P-201ENST00000516682 145 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 MIR4762-201ENST00000585261 75 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 MIR1255B1-201ENST00000636325 63 ntBASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LYSMD3Q7Z3D4 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 Y_RNA.360-201ENST00000365512 102 ntBASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 Y_RNA.454-201ENST00000384224 113 ntBASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 RPL21P3-201ENST00000395517 478 ntBASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 MIR548Z-201ENST00000584743 97 ntBASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 Y_RNA.773-201ENST00000607168 90 ntBASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LYSMD3Q7Z3D4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-661P-201ENST00000362409 107 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-363P-201ENST00000362895 105 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-1125P-201ENST00000363601 107 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 snoU2-30.1-201ENST00000365012 70 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-675P-201ENST00000384236 104 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-733P-201ENST00000410759 104 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 MICF-203ENST00000432679 129 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 AC087499.4-201ENST00000448505 178 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-521P-201ENST00000516663 105 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 SCARNA3-201ENST00000517097 143 ntBASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LYSMD3Q7Z3D4 ICE2P2-201ENST00000483823 2787 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 SNORD115-19-201ENST00000363098 82 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 SNORD115-18-201ENST00000363293 82 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 U8.5-201ENST00000364528 136 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 SNORD115-17-201ENST00000364612 82 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 RNU2-48P-201ENST00000410694 191 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 SNORD45.4-201ENST00000516629 73 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 AC078899.2-201ENST00000595282 212 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 AL513534.2-201ENST00000603836 250 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 MIR5739-201ENST00000619803 80 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 AC110079.1-202ENST00000635213 138 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 MIR203B-201ENST00000636080 86 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 U6.98-201ENST00000637157 84 ntBASIC3.37□□□□□ -1.87
LYSMD3Q7Z3D4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 MIR342-201ENST00000362212 99 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-409P-201ENST00000384114 104 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 RNA5SP323-201ENST00000391094 133 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-279P-201ENST00000391297 101 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 FO393413.1-201ENST00000402892 195 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 RN7SKP200-201ENST00000410564 320 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 BTF3P4-201ENST00000418852 495 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 SNX2P2-201ENST00000424553 323 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 AC107083.1-201ENST00000439643 279 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 BX510359.1-201ENST00000456973 237 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 RPS23P4-201ENST00000487908 423 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 MIR3199-1-201ENST00000582434 88 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 MIR4276-201ENST00000584832 70 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 AL353149.1-201ENST00000610667 244 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 MIR3651-201ENST00000630427 90 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 AC095038.3-201ENST00000634439 195 ntBASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LYSMD3Q7Z3D4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 RNU4-67P-201ENST00000364569 141 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-979P-201ENST00000383896 107 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 SNORA8-201ENST00000384574 139 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 MIR95-201ENST00000385072 81 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 MIR605-201ENST00000385078 83 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 AL627390.1-201ENST00000396055 340 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 RNU6-402P-201ENST00000410678 103 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 RNA5SP144-201ENST00000410846 116 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 RNA5SP120-201ENST00000410900 112 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 AL512326.2-201ENST00000426359 151 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 RNU7-94P-201ENST00000459576 63 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 AC004812.1-201ENST00000540773 146 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 MIR5588-201ENST00000581890 63 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 MIR8058-201ENST00000615737 89 ntBASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LYSMD3Q7Z3D4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
LYSMD3Q7Z3D4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms