Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AC022616.4-201ENST00000522985 181 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 PIGPP4-201ENST00000584447 307 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 MIR4723-201ENST00000585070 81 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 MIR4791-201ENST00000607666 84 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 AL133215.3-201ENST00000609801 448 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 AL391834.2-201ENST00000609982 546 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 AC091304.10-201ENST00000641554 121 ntBASIC-0.62□□□□□ -2.51
USP54Q70EL1 RNU6-324P-201ENST00000363957 106 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.63□□□□□ -2.51
USP54Q70EL1 RPL30P16-201ENST00000419341 429 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 Z82188.1-201ENST00000436709 154 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 AC079354.2-201ENST00000453523 154 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 TPTE2P5-203ENST00000458118 728 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 AC046134.1-201ENST00000514454 666 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 RNY1P9-201ENST00000532431 109 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 HULC.1-201ENST00000612720 240 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.63□□□□□ -2.51
USP54Q70EL1 RNY3P9-201ENST00000384727 106 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 SNORA26-201ENST00000391286 122 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 RNU6-847P-201ENST00000411115 108 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 MTCO2P8-201ENST00000412213 658 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 SSR1P2-201ENST00000415208 787 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.64□□□□□ -2.51
USP54Q70EL1 HMGN2P32-201ENST00000444648 269 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 SNORD57-201ENST00000448188 72 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 AC018448.1-201ENST00000552843 316 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 MIR4263-201ENST00000584745 83 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 AL357078.3-201ENST00000607528 618 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 MIR6828-201ENST00000636181 60 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 AL162726.3-218ENST00000636401 95 ntBASIC-0.64□□□□□ -2.51
USP54Q70EL1 U8.5-201ENST00000364528 136 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 AL008987.1-201ENST00000415528 237 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 MTCO1P5-201ENST00000433573 344 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 AC091179.3-201ENST00000474761 144 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 RNU6-830P-201ENST00000516353 107 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.65□□□□□ -2.51
USP54Q70EL1 SNORD50.1-201ENST00000362987 71 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 SNORA63C-201ENST00000364578 129 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
USP54Q70EL1 RNU6-159P-201ENST00000391080 106 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 AL606923.1-201ENST00000406616 190 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.65□□□□□ -2.51
USP54Q70EL1 RNU7-62P-201ENST00000458856 62 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 snoU13.16-201ENST00000459350 104 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 SNORD126-201ENST00000459475 77 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 AL355297.3-201ENST00000604082 446 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 AC008536.2-201ENST00000607284 349 ntBASIC-0.65□□□□□ -2.51
USP54Q70EL1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.65□□□□□ -2.51
USP54Q70EL1 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 RNU6-442P-201ENST00000383968 104 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 MIR1468-201ENST00000410600 86 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 BX295541.1-201ENST00000417774 250 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 MTCO1P29-201ENST00000496868 288 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.66□□□□□ -2.52
USP54Q70EL1 RNU2-60P-201ENST00000517290 128 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.66□□□□□ -2.52
USP54Q70EL1 MIR5696-201ENST00000578474 85 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 AC087685.1-201ENST00000587507 141 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 AP001506.1-201ENST00000615444 211 ntBASIC-0.66□□□□□ -2.52
USP54Q70EL1 SUMO1P2-201ENST00000452524 304 ntBASIC-0.67□□□□□ -2.52
USP54Q70EL1 SNORD42A-201ENST00000459584 64 ntBASIC-0.67□□□□□ -2.52
USP54Q70EL1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.67□□□□□ -2.52
USP54Q70EL1 RNU7-175P-201ENST00000515915 61 ntBASIC-0.67□□□□□ -2.52
USP54Q70EL1 SNORA25.10-201ENST00000515926 124 ntBASIC-0.67□□□□□ -2.52
USP54Q70EL1 RNU6-189P-201ENST00000516120 101 ntBASIC-0.67□□□□□ -2.52
USP54Q70EL1 AC005828.6-201ENST00000606610 232 ntBASIC-0.67□□□□□ -2.52
USP54Q70EL1 AP000240.1-201ENST00000609910 452 ntBASIC-0.67□□□□□ -2.52
USP54Q70EL1 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 SNORA51.10-201ENST00000384418 136 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 UQCRBP2-201ENST00000447827 297 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.68□□□□□ -2.52
USP54Q70EL1 AC026782.1-201ENST00000512952 449 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 RNU6-138P-201ENST00000515952 107 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 RNU6-135P-201ENST00000516769 101 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 AP003461.1-201ENST00000528866 78 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.68□□□□□ -2.52
USP54Q70EL1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.68□□□□□ -2.52
USP54Q70EL1 AC103705.1-201ENST00000619013 241 ntBASIC-0.68□□□□□ -2.52
USP54Q70EL1 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU6-187P-201ENST00000384139 106 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU6-790P-201ENST00000384479 105 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 MIR518F-201ENST00000384973 87 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 SNORA40.3-201ENST00000390964 122 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU2-9P-201ENST00000410194 145 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AC087499.4-201ENST00000448505 178 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AP002963.1-201ENST00000530590 184 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.69□□□□□ -2.52
USP54Q70EL1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.69□□□□□ -2.52
USP54Q70EL1 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 MIR5706-201ENST00000579841 80 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 MIR5692C1-201ENST00000585309 91 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 MIR8055-201ENST00000610739 97 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 MIR7107-201ENST00000611489 80 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AC073534.2-201ENST00000620377 381 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms