Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 RNU6-20P-201ENST00000384106 107 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 Y_RNA.476-201ENST00000384347 108 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 MIR513A1-201ENST00000385138 129 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 RNA5SP109-201ENST00000391010 116 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 AC108667.1-201ENST00000428618 249 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 AC027119.1-201ENST00000440877 241 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 MRPS10P1-201ENST00000448483 130 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 SNORD65B-201ENST00000459126 73 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 SNORA40.9-201ENST00000515895 93 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 RNU6-1023P-201ENST00000516137 106 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 AC015688.6-201ENST00000577737 104 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 MIR4781-201ENST00000585250 76 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NHLRC1Q6VVB1 RNU6-626P-201ENST00000363354 107 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 RNU6-454P-201ENST00000364292 107 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 SNORD63-201ENST00000384262 68 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 SNORD58.1-201ENST00000391313 66 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 AL603910.2-201ENST00000407268 136 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 MIR1287-201ENST00000408492 90 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 RN7SKP101-201ENST00000411376 320 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 RPL39P38-201ENST00000467018 153 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 AL442067.1-201ENST00000613261 223 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 AC068700.1-201ENST00000565862 3754 ntBASIC1.41□□□□□ -2.18
NHLRC1Q6VVB1 MIR335-201ENST00000362173 94 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 MIR302D-201ENST00000362275 68 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.20-201ENST00000362479 113 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.76-201ENST00000362931 109 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 SNORD27-201ENST00000363981 72 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.274-201ENST00000364714 101 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 SNORA4.2-201ENST00000365313 147 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-997P-201ENST00000384725 107 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 MIR194-1-201ENST00000384892 85 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 MIR3668-201ENST00000582138 75 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 AL929325.1-201ENST00000603096 117 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 AC011921.3-201ENST00000605540 361 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 MIR8054-201ENST00000620877 86 ntBASIC1.4□□□□□ -2.19
NHLRC1Q6VVB1 AC018630.2-201ENST00000534866 2403 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 AL391987.6-201ENST00000305671 199 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNY1P10-201ENST00000363268 113 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.277-201ENST00000364754 102 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-290P-201ENST00000365212 101 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNA5SP190-201ENST00000365222 118 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.416-201ENST00000384014 113 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-203P-201ENST00000384038 104 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-440P-201ENST00000390882 105 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 MIR548I3-201ENST00000408378 149 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 MIR548I1-201ENST00000408810 149 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 AL135790.2-201ENST00000437701 267 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-625P-201ENST00000459412 107 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RPL30P7-201ENST00000479312 323 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 SERF1AP1-201ENST00000514575 187 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-138P-201ENST00000515952 107 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 RNU7-172P-201ENST00000517125 64 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 AC130289.1-201ENST00000577321 73 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 MIR3145-201ENST00000580727 82 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.39□□□□□ -2.19
NHLRC1Q6VVB1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 RNU2-64P-201ENST00000411315 191 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 RAB28P5-201ENST00000427490 651 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 RNU7-28P-201ENST00000516759 62 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 AC018448.1-201ENST00000552843 316 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 AC141273.2-201ENST00000618989 130 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 AL513423.1-201ENST00000621695 132 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 AC095038.3-201ENST00000634439 195 ntBASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NHLRC1Q6VVB1 MIR410-201ENST00000362222 80 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.117-201ENST00000363294 101 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 RNY1-201ENST00000364228 113 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.489-201ENST00000384410 101 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms