Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.69□□□□□ -2.52
CSPG4Q6UVK1 AC005776.1-201ENST00000603164 290 ntBASIC-0.69□□□□□ -2.52
CSPG4Q6UVK1 AC091965.4-201ENST00000607691 587 ntBASIC-0.69□□□□□ -2.52
CSPG4Q6UVK1 SNORA1.2-201ENST00000365189 134 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 RNU6-207P-201ENST00000384137 107 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AC243428.1-201ENST00000421099 264 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AC092447.3-201ENST00000426027 686 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 SNORA13-201ENST00000458790 133 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AC010424.1-201ENST00000506336 297 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 RNY4-201ENST00000516507 96 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 RNU6-881P-201ENST00000516813 102 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 RNU6-702P-201ENST00000364982 107 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 RNU6-117P-201ENST00000365415 107 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AC116562.3-201ENST00000506136 177 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AC091133.4-201ENST00000511142 308 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AC245297.2-201ENST00000610119 565 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 AL121757.2-201ENST00000611223 313 ntBASIC-0.7□□□□□ -2.52
CSPG4Q6UVK1 SNORD115-2-201ENST00000362842 82 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 RNU6-227P-201ENST00000362865 103 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 SNORA63C-201ENST00000364578 129 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 SNORD110-201ENST00000408189 75 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AC131281.1-201ENST00000522984 164 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 MIR6129-201ENST00000616087 109 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 MIR101-2-201ENST00000362195 79 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AC123904.2-201ENST00000548059 300 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AP002802.2-201ENST00000605877 235 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 MIR6851-201ENST00000617060 67 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AC019226.2-201ENST00000625973 424 ntBASIC-0.71□□□□□ -2.52
CSPG4Q6UVK1 AL596211.1-201ENST00000569873 2277 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 RNU6-236P-201ENST00000363886 106 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 AL031274.1-201ENST00000450334 232 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 AL157687.1-201ENST00000554853 619 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 AC138749.4-201ENST00000563970 127 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 MIR4676-201ENST00000583078 72 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 SNORD11B-201ENST00000607707 90 ntBASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.72□□□□□ -2.52
CSPG4Q6UVK1 MIR148A-201ENST00000362215 68 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 RNU6-354P-201ENST00000383862 107 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 RNU6-610P-201ENST00000384264 107 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 SNORA26.5-201ENST00000391215 123 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 MTCO3P40-201ENST00000392516 676 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 AC137499.1-201ENST00000427602 88 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 AL117351.1-201ENST00000438864 766 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 RPL39P5-202ENST00000512505 151 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 UBL5P4-201ENST00000562584 236 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 MTND3P13-201ENST00000574391 343 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 AC016911.1-201ENST00000613297 452 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 AC097460.3-201ENST00000623099 442 ntBASIC-0.72□□□□□ -2.53
CSPG4Q6UVK1 U8.6-201ENST00000364939 135 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 RNU6-855P-201ENST00000410395 104 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 RNU6-847P-201ENST00000411115 108 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 MTND1P11-201ENST00000456661 876 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 MIR3118-1-201ENST00000581787 76 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 AC002044.1-201ENST00000606707 158 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 AC022418.1-201ENST00000624118 445 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 SNORD114-7-201ENST00000362520 77 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 SNORD56.2-201ENST00000363242 71 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 SNORD115.1-201ENST00000391109 76 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 MIR320B2-201ENST00000408479 138 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 AC074085.1-201ENST00000413598 418 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 MTND3P9-201ENST00000429526 346 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 AC021146.6-201ENST00000514659 117 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 MIR4752-201ENST00000579672 72 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 BNIP3P39-201ENST00000601077 554 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 U7.6-201ENST00000610841 64 ntBASIC-0.73□□□□□ -2.53
CSPG4Q6UVK1 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.74□□□□□ -2.53
CSPG4Q6UVK1 SNORD38B-201ENST00000384690 67 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms