Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 YPEL5P2-201ENST00000605553 359 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 AC073476.4-201ENST00000628409 72 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 AC095038.3-201ENST00000634439 195 ntBASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXR1Q6PIV2 AL353746.1-201ENST00000566293 6881 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 SNORD115-28-201ENST00000363931 81 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 RNU6-219P-201ENST00000364728 107 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 SNORD115-35-201ENST00000365122 82 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 Y_RNA.351-201ENST00000365436 96 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 RNA5SP467-201ENST00000391274 118 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 AC005326.1-201ENST00000429197 123 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 SNRPGP3-201ENST00000469405 227 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 RN7SL594P-201ENST00000470590 287 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 AC139453.2-201ENST00000487255 133 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 RNU6-586P-201ENST00000517265 104 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
FOXR1Q6PIV2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 AL512326.2-201ENST00000426359 151 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 FTH1P12-201ENST00000432137 551 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 SNORA31.4-201ENST00000516049 129 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 RNU7-99P-201ENST00000516271 62 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 SNORA31.21-201ENST00000517180 77 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 AC091932.4-201ENST00000623386 200 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 MIR6079-201ENST00000635807 62 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 U6.108-201ENST00000637764 58 ntBASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXR1Q6PIV2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
FOXR1Q6PIV2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 SNORD115-13-201ENST00000363358 82 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 Y_RNA.155-201ENST00000363632 101 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 SNORD115-16-201ENST00000363887 82 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 RNU6-268P-201ENST00000364174 107 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 SNORD115-1-201ENST00000364961 82 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 SNORA46-201ENST00000384762 135 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 AC096949.1-201ENST00000412047 152 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 AC009414.1-201ENST00000427200 443 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 SNRPGP14-201ENST00000435400 219 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 RNU7-171P-201ENST00000459581 62 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 AC093259.1-201ENST00000509755 300 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 RNU6-856P-201ENST00000516959 98 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 AC091544.4-201ENST00000555268 342 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 MIR4694-201ENST00000578534 80 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 AC006441.5-201ENST00000612680 209 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 AL049781.1-201ENST00000623195 3585 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 AF117829.1-206ENST00000621883 3802 ntBASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
FOXR1Q6PIV2 SNORA1B-201ENST00000362535 133 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 RNU6-60P-201ENST00000364792 103 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 HSPE1P26-201ENST00000405341 275 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 AL445646.1-201ENST00000431784 216 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 AL049873.1-201ENST00000480540 376 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 RNA5SP217-201ENST00000515959 91 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 MIR3683-201ENST00000580847 82 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 MIR203B-201ENST00000636080 86 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 AC018630.2-201ENST00000534866 2403 ntBASIC3.39□□□□□ -1.87
FOXR1Q6PIV2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 AL035425.3-201ENST00000564206 4996 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 MIR342-201ENST00000362212 99 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 Y_RNA.10-201ENST00000362371 110 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 RNU6-363P-201ENST00000362895 105 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 Y_RNA.507-201ENST00000384500 99 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 RNU6-733P-201ENST00000410759 104 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 AL031183.1-201ENST00000457667 207 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 RNA5SP112-201ENST00000515937 99 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 RNU6-341P-201ENST00000516973 96 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 AC087685.1-201ENST00000587507 141 ntBASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXR1Q6PIV2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 Y_RNA.454-201ENST00000384224 113 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 Y_RNA.467-201ENST00000384297 102 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 SNORD116-22-201ENST00000384430 92 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 RNU6-24P-201ENST00000384440 107 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 MIR802-201ENST00000390235 94 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 SNORD17-201ENST00000390930 237 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 RNU2-37P-201ENST00000410695 177 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 RPS15AP28-201ENST00000435088 386 ntBASIC3.37□□□□□ -1.87
FOXR1Q6PIV2 SNORA4.4-201ENST00000515921 135 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms