Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 Y_RNA.144-201ENST00000363521 113 ntBASIC2.02□□□□□ -2.09
PPP4R4Q6NUP7 RNU1-78P-201ENST00000391248 165 ntBASIC2.02□□□□□ -2.09
PPP4R4Q6NUP7 RNU7-116P-201ENST00000516940 62 ntBASIC2.02□□□□□ -2.09
PPP4R4Q6NUP7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.02□□□□□ -2.09
PPP4R4Q6NUP7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.02□□□□□ -2.09
PPP4R4Q6NUP7 snoU18.1-201ENST00000629629 71 ntBASIC2.02□□□□□ -2.09
PPP4R4Q6NUP7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.193-201ENST00000363979 102 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-740P-201ENST00000364734 105 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-196P-201ENST00000384315 107 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-424P-201ENST00000384367 105 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 MTCO2P33-201ENST00000402100 465 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 AL034345.1-201ENST00000407768 123 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 BTF3P11-201ENST00000426582 477 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 AL356320.1-201ENST00000429616 163 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 CALM2P4-201ENST00000430810 426 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 HSPE1P24-201ENST00000450782 238 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 AL049830.1-201ENST00000468034 425 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 RNU1-41P-201ENST00000516161 162 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 RNU1-48P-201ENST00000516400 162 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 MIR4643-201ENST00000577473 78 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 MIR4285-201ENST00000581001 85 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 MIR4422-201ENST00000581938 83 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 AL591926.4-201ENST00000616895 298 ntBASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.14-201ENST00000362415 103 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.44-201ENST00000362676 108 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 SNORD1A-201ENST00000364968 72 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.452-201ENST00000384202 108 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-463P-201ENST00000384340 107 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-1289P-201ENST00000384431 106 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2□□□□□ -2.09
PPP4R4Q6NUP7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2□□□□□ -2.09
PPP4R4Q6NUP7 AC013791.1-201ENST00000616619 62 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 U4.1-201ENST00000620349 87 ntBASIC2□□□□□ -2.09
PPP4R4Q6NUP7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2□□□□□ -2.09
PPP4R4Q6NUP7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.288-201ENST00000364854 92 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.556-201ENST00000384677 113 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 RNA5SP482-201ENST00000391269 118 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 U8.16-201ENST00000391279 133 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 MIR1302-3-201ENST00000408128 138 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 SNORA36B-201ENST00000410438 131 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 RNA5SP200-201ENST00000516360 103 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.680-201ENST00000516441 93 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 RNU7-28P-201ENST00000516759 62 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 SNORA28-201ENST00000606769 126 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 7SK.10-201ENST00000621414 298 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 U6.104-201ENST00000637979 90 ntBASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
PPP4R4Q6NUP7 WWP1P1-201ENST00000466609 2769 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-899P-201ENST00000363947 107 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 AL603910.2-201ENST00000407268 136 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 PGBD4P5-201ENST00000445958 426 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 AC245517.4-201ENST00000448601 281 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 SNORD2.1-201ENST00000458762 69 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 snoU13.26-201ENST00000459452 105 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 RPL23AP54-201ENST00000495129 419 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 RNA5SP168-201ENST00000516642 112 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 MIR4762-201ENST00000585261 75 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 AC073349.3-201ENST00000617616 186 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 AL513423.1-201ENST00000621695 132 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 MIR8063-201ENST00000621930 81 ntBASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PPP4R4Q6NUP7 MIR126-201ENST00000362291 85 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.203-201ENST00000364106 102 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 U8.5-201ENST00000364528 136 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-969P-201ENST00000383900 105 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 RNU6-211P-201ENST00000384047 107 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 MIR504-201ENST00000385065 83 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 MIR3149-201ENST00000584629 83 ntBASIC1.97□□□□□ -2.09
PPP4R4Q6NUP7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
PPP4R4Q6NUP7 SNORD33-201ENST00000362761 85 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.82-201ENST00000363000 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.92-201ENST00000363043 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-674P-201ENST00000363831 107 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.235-201ENST00000364412 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.306-201ENST00000365015 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.312-201ENST00000365089 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.322-201ENST00000365151 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 MIR1278-201ENST00000408753 81 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 RN7SKP223-201ENST00000410582 62 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms