Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC099654.14-201ENST00000638599 341 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.86□□□□□ -2.27
ATL3Q6DD88 Y_RNA.446-201ENST00000384178 104 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 RNU6-708P-201ENST00000384217 107 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 SNORD116-29-201ENST00000384516 83 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 AC004941.2-201ENST00000427009 228 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.85□□□□□ -2.27
ATL3Q6DD88 AC098614.3-201ENST00000438957 440 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 RNU7-169P-201ENST00000459456 61 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 CYCTP-201ENST00000504253 315 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 AC114811.1-201ENST00000507207 168 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 RNU6-559P-201ENST00000516151 98 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 MIR3192-201ENST00000584920 77 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 AC022441.3-201ENST00000605737 136 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.85□□□□□ -2.27
ATL3Q6DD88 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ATL3Q6DD88 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
ATL3Q6DD88 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 RNU6-490P-201ENST00000362985 107 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 SNORD114-26-201ENST00000363543 72 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 Y_RNA.336-201ENST00000365307 109 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 RNU6-969P-201ENST00000383900 105 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 PIGPP3-201ENST00000425307 415 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 AC093019.1-201ENST00000443135 252 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 LINC01399-202ENST00000458450 244 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 Y_RNA.653-201ENST00000459091 95 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.84□□□□□ -2.27
ATL3Q6DD88 AP003716.2-201ENST00000528260 108 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 MIR4659A-201ENST00000580269 81 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 AC005176.2-201ENST00000596933 147 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 AC006380.1-201ENST00000603598 186 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 AL391903.3-201ENST00000612158 163 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
ATL3Q6DD88 AL442644.1-201ENST00000454390 3105 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 RNU6-1283P-201ENST00000365314 105 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 RNU6-342P-201ENST00000384521 104 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 MIR522-201ENST00000385071 87 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 MIR1298-201ENST00000408783 112 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.83□□□□□ -2.28
ATL3Q6DD88 RNU7-21P-201ENST00000459430 62 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 RNU6-699P-201ENST00000517081 110 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 RBM11P1-201ENST00000604951 799 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 AC108706.1-201ENST00000611053 297 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 AC011476.5-201ENST00000615594 130 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 U2.1-201ENST00000618978 145 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 AC091925.1-201ENST00000623204 462 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 MTND4LP32-201ENST00000636111 270 ntBASIC0.83□□□□□ -2.28
ATL3Q6DD88 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
ATL3Q6DD88 Y_RNA.27-201ENST00000362540 103 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 SNORD68-201ENST00000363214 84 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 Y_RNA.146-201ENST00000363549 102 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 Y_RNA.230-201ENST00000364348 109 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 AC117470.1-201ENST00000381974 330 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 Y_RNA.387-201ENST00000383918 102 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 RNU6-163P-201ENST00000384396 106 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 RNU6-1105P-201ENST00000384774 107 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 SNORD78.2-201ENST00000391076 69 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 Y_RNA.605-201ENST00000410577 105 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.82□□□□□ -2.28
ATL3Q6DD88 PRDX4P1-201ENST00000507189 574 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 Y_RNA.718-201ENST00000517110 102 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
ATL3Q6DD88 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
ATL3Q6DD88 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
ATL3Q6DD88 Y_RNA.142-201ENST00000363491 102 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 AC096644.2-201ENST00000429278 159 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 AC099799.1-201ENST00000439809 192 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.81□□□□□ -2.28
ATL3Q6DD88 AC245047.8-201ENST00000456455 284 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 MIR4423-201ENST00000580922 80 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 AC005972.2-201ENST00000604690 348 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 AC010205.1-201ENST00000616668 449 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 U6.92-201ENST00000636464 89 ntBASIC0.81□□□□□ -2.28
ATL3Q6DD88 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ATL3Q6DD88 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 Y_RNA.253-201ENST00000364562 112 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 Y_RNA.314-201ENST00000365114 102 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 Y_RNA.463-201ENST00000384271 102 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 RNU6-1297P-201ENST00000384415 104 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 SNORA75.2-201ENST00000391138 150 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 SNORA75.3-201ENST00000391231 150 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.8□□□□□ -2.28
ATL3Q6DD88 RPS20P10-201ENST00000451209 253 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 RNU7-152P-201ENST00000458982 64 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 RNU6-155P-201ENST00000516347 100 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 AC022616.4-201ENST00000522985 181 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 AL132765.2-201ENST00000610812 351 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 AC122108.2-201ENST00000611946 526 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.8□□□□□ -2.28
ATL3Q6DD88 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
ATL3Q6DD88 Y_RNA.329-201ENST00000365209 107 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms