Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 snoU2-30.2-201ENST00000362805 70 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 RNU6-888P-201ENST00000363010 101 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 RNA5SP89-201ENST00000410300 108 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 RNU2-63P-201ENST00000410792 194 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 SNRPGP10-201ENST00000432323 225 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 NDUFA4P2-201ENST00000489989 244 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 MRPS17P9-201ENST00000511924 393 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 SNORA72.7-201ENST00000516349 94 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 MIR4738-201ENST00000579134 87 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 MTND5P18-201ENST00000445624 1801 ntBASIC3.28□□□□□ -1.88
COL13A1Q5TAT6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.28□□□□□ -1.89
COL13A1Q5TAT6 AC008555.8-201ENST00000623602 2168 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 RNU6-743P-201ENST00000364151 106 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 SNORA64-201ENST00000384674 134 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 RNU6-321P-201ENST00000410912 106 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 POLR2J4-204ENST00000418424 324 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 AC060773.1-201ENST00000421698 310 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 AL353689.1-201ENST00000438895 199 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 RPL23AP42-201ENST00000471152 471 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 RNA5SP236-201ENST00000516169 116 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 MIR3129-201ENST00000581095 76 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 AL359075.3-201ENST00000613288 217 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 AC096644.4-201ENST00000563417 2912 ntBASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL13A1Q5TAT6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 RNU6-508P-201ENST00000363231 103 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 RNU6-1186P-201ENST00000410429 97 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 RNA5SP136-201ENST00000410906 107 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 AL031737.1-201ENST00000450125 223 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 AC011406.1-201ENST00000512440 370 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 RNU6-341P-201ENST00000516973 96 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 AC008507.4-201ENST00000585464 127 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 AC006254.2-201ENST00000603259 279 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 snoU13.31-201ENST00000607291 104 ntBASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
COL13A1Q5TAT6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 MIR340-201ENST00000362125 95 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 Y_RNA.253-201ENST00000364562 112 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 CD24P4-201ENST00000382840 243 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 RNU6-32P-201ENST00000383948 107 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 SNORA1-201ENST00000384107 130 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 RNU6-13P-201ENST00000384248 107 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 RNU6-12P-201ENST00000384604 107 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 RNU6-41P-201ENST00000384741 107 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 MIR548A1-201ENST00000385041 97 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 MIR561-201ENST00000385216 97 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 AC002075.2-201ENST00000425207 252 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 AL353149.1-201ENST00000610667 244 ntBASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL13A1Q5TAT6 AC017071.1-201ENST00000564407 2204 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 RNU1-17P-201ENST00000363022 152 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 RNU1-23P-201ENST00000363361 144 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 Y_RNA.224-201ENST00000364308 111 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 SNORD61-201ENST00000384252 73 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 SNORA80E-201ENST00000384744 137 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 AC244505.4-201ENST00000434905 287 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 SSXP5-201ENST00000443473 287 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 AC023141.11-201ENST00000508864 202 ntBASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
COL13A1Q5TAT6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 Y_RNA.281-201ENST00000364774 94 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 RNU2-48P-201ENST00000410694 191 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 AC233266.1-201ENST00000454518 96 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 RNU7-94P-201ENST00000459576 63 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 RPS29P24-201ENST00000486345 171 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 AC096725.1-201ENST00000514266 313 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 RNU7-128P-201ENST00000517247 62 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 AC242852.1-201ENST00000612151 96 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 AC244015.1-201ENST00000622301 99 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 MIR6079-201ENST00000635807 62 ntBASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
COL13A1Q5TAT6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 WWP1P1-201ENST00000466609 2769 ntBASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 MIR515-2-201ENST00000384883 83 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms