Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 SNORA70.25-201ENST00000612741 95 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 AC127459.3-201ENST00000624328 466 ntBASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.27□□□□□ -2.61
NUP188Q5SRE5 RNU4-16P-201ENST00000364737 141 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 RNU6-393P-201ENST00000384475 107 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 SNORA40.2-201ENST00000390847 128 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 MTCO2P11-201ENST00000431069 680 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 RNU6-475P-201ENST00000516073 104 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 MIR3115-201ENST00000577915 68 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 MIR4306-201ENST00000583390 91 ntBASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.28□□□□□ -2.61
NUP188Q5SRE5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 SNORA27.1-201ENST00000362604 124 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU6-179P-201ENST00000363350 107 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU6-727P-201ENST00000363592 107 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 SNORD115-8-201ENST00000363856 82 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU4-1-201ENST00000363925 141 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU6-280P-201ENST00000364145 104 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 SNORD115-38-201ENST00000365037 82 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 SSR1P2-201ENST00000415208 787 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AL354751.2-201ENST00000415471 210 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RPL7P42-201ENST00000481005 679 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU6-881P-201ENST00000516813 102 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 MT-TF-201ENST00000387314 71 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU6-131P-201ENST00000391144 107 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 MTCYBP36-201ENST00000404146 440 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU2-8P-201ENST00000410727 190 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AL138752.1-201ENST00000452964 351 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 MTCO2P6-201ENST00000463134 685 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 MTCO3P38-201ENST00000468910 766 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU2-13P-201ENST00000515909 113 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNA5SP470-201ENST00000516463 106 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 RNU7-181P-201ENST00000517234 74 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 MTND5P34-201ENST00000568888 325 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 MIR4280-201ENST00000582178 76 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 MIR4307-201ENST00000582802 84 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 uc_338.11-201ENST00000619132 160 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 AC022960.3-201ENST00000619794 441 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 uc_338.10-201ENST00000621872 182 ntBASIC-1.29□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 MIR876-201ENST00000401147 81 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 RNU6-602P-201ENST00000411155 105 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 RPL22P17-201ENST00000438729 315 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 MTCO2P29-201ENST00000465212 189 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 AC069113.1-201ENST00000517763 267 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 AC006441.5-201ENST00000612680 209 ntBASIC-1.3□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 SNORD115-7-201ENST00000365306 82 ntBASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 MRPL42P2-201ENST00000403169 426 ntBASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 SNRPGP10-201ENST00000432323 225 ntBASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 MTND2P32-201ENST00000521584 1038 ntBASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 AC022784.5-201ENST00000522241 437 ntBASIC-1.31□□□□□ -2.62
NUP188Q5SRE5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 AF186996.7-201ENST00000492781 209 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 RNU6-830P-201ENST00000516353 107 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 U6.114-201ENST00000636407 96 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 MTND5P17-201ENST00000418405 1603 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 RNU4-36P-201ENST00000364294 144 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 RNU6-621P-201ENST00000364752 109 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 RNU6-117P-201ENST00000365415 107 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 SNORD110-201ENST00000408189 75 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 ELOCP4-201ENST00000420090 333 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 AC018865.2-201ENST00000423631 129 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 MTND3P9-201ENST00000429526 346 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 SNORA18.4-201ENST00000516440 124 ntBASIC-1.32□□□□□ -2.62
NUP188Q5SRE5 RNU6-509P-201ENST00000363519 107 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 SNORD114-25-201ENST00000363742 72 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 U8.6-201ENST00000364939 135 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 RNU6-224P-201ENST00000384055 107 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 SNORD115.1-201ENST00000391109 76 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 MTCO2P27-201ENST00000420740 428 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 AC073464.1-201ENST00000429823 534 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 AL137792.2-201ENST00000443484 235 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 AC091959.1-201ENST00000495857 238 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 MIR4491-201ENST00000581087 68 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 MIR7844-201ENST00000616161 122 ntBASIC-1.33□□□□□ -2.62
NUP188Q5SRE5 RNY1P12-201ENST00000364251 105 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms