Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.572-201ENST00000384757 98 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 RN7SKP223-201ENST00000410582 62 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 AL049830.1-201ENST00000468034 425 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 AC098479.1-201ENST00000609225 154 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KHDC1Q4VXA5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 SNORA1B-201ENST00000362535 133 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.121-201ENST00000363309 113 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 RNU6-103P-201ENST00000363686 107 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 snoU2_19.4-201ENST00000364329 80 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 RNU4-41P-201ENST00000364426 143 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 RNU6-296P-201ENST00000384608 107 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.571-201ENST00000384753 98 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 MIR616-201ENST00000385293 97 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 PIGPP3-201ENST00000425307 415 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 RNU1-41P-201ENST00000516161 162 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 RNU1-48P-201ENST00000516400 162 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 RNU2-56P-201ENST00000516826 190 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 MIR8054-201ENST00000620877 86 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.18□□□□□ -2.06
KHDC1Q4VXA5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.229-201ENST00000364347 113 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.233-201ENST00000364407 101 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.238-201ENST00000364441 102 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 RNU6-950P-201ENST00000384651 107 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 RNU6-440P-201ENST00000390882 105 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 MIR1278-201ENST00000408753 81 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 RNA5SP100-201ENST00000410903 110 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 RNA5SP59-201ENST00000410922 110 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 RN7SKP101-201ENST00000411376 320 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 HMGN1P7-201ENST00000491722 313 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 AC107393.1-201ENST00000512403 346 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 RNU7-28P-201ENST00000516759 62 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KHDC1Q4VXA5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 RNU6-1209P-201ENST00000363655 107 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.796-201ENST00000364268 102 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.799-201ENST00000364992 102 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 RNU4-70P-201ENST00000384579 139 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 RNU2-7P-201ENST00000410794 178 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 RN7SL429P-201ENST00000479090 223 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 RN7SL489P-201ENST00000486185 223 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 RN7SL327P-201ENST00000488659 223 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 AL391903.3-201ENST00000612158 163 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 RN7SL853P-201ENST00000617250 223 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 FTX_2.1-201ENST00000618816 94 ntBASIC2.16□□□□□ -2.06
KHDC1Q4VXA5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KHDC1Q4VXA5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 RNY3P5-201ENST00000384127 102 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 SNORA64-201ENST00000384674 134 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 RNA5SP482-201ENST00000391269 118 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 RN7SKP200-201ENST00000410564 320 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 AL158823.1-201ENST00000418441 478 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 AL356320.1-201ENST00000429616 163 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 AL021397.1-201ENST00000451806 248 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 SCARNA8-201ENST00000515924 131 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 RNA5SP481-201ENST00000516814 122 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 AC022559.1-201ENST00000520905 205 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 RPL23AP91-201ENST00000569211 455 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 MIR1273D-201ENST00000577266 86 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 MIR4744-201ENST00000581563 82 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 AL021707.8-201ENST00000609428 183 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 JPX_2.1-201ENST00000614161 69 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 ZNF702P-202ENST00000434269 1966 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
KHDC1Q4VXA5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 SNORA67.3-201ENST00000384366 140 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 MT-TR-201ENST00000387439 65 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 RNU6-1228P-201ENST00000391014 107 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 RNA5SP212-201ENST00000391223 107 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 RNA5SP425-201ENST00000410336 112 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 RNU2-2P-201ENST00000410396 191 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 AC023449.1-201ENST00000454464 154 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 SNORA31.10-201ENST00000516482 106 ntBASIC2.14□□□□□ -2.07
KHDC1Q4VXA5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms