Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC015720.1-201ENST00000565251 277 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 SUB1P4-201ENST00000566062 339 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 MIR5692C2-201ENST00000577959 77 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 MIR5089-201ENST00000580047 84 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 SNRPGP19-201ENST00000603826 189 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 AC005972.2-201ENST00000604690 348 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 AL365265.1-201ENST00000621045 234 ntBASIC2.29□□□□□ -2.04
LONRF3Q496Y0 SNORA33-201ENST00000363664 130 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 RNA5SP323-201ENST00000391094 133 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 Z98949.2-201ENST00000440996 144 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.28□□□□□ -2.04
LONRF3Q496Y0 AC117454.1-201ENST00000491120 168 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 AC108210.2-201ENST00000503681 201 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.28□□□□□ -2.04
LONRF3Q496Y0 AC008834.1-201ENST00000511612 175 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 Y_RNA.700-201ENST00000516806 100 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 RNU7-128P-201ENST00000517247 62 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 AC103810.8-201ENST00000607347 118 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.28□□□□□ -2.04
LONRF3Q496Y0 AC068700.1-201ENST00000565862 3754 ntBASIC2.28□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.262-201ENST00000364641 102 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.785-201ENST00000384290 109 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 RNU6-376P-201ENST00000384731 106 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 MIR520A-201ENST00000384862 85 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LONRF3Q496Y0 RNU2-2P-201ENST00000410396 191 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 AL162725.1-201ENST00000435405 301 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 RNU7-99P-201ENST00000516271 62 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 RNY3P16-201ENST00000516338 101 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 RNU7-115P-201ENST00000516433 55 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 AC024405.2-202ENST00000532731 184 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 AL359075.3-201ENST00000613288 217 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 MIR548AY-201ENST00000617669 107 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 U6.108-201ENST00000637764 58 ntBASIC2.27□□□□□ -2.05
LONRF3Q496Y0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LONRF3Q496Y0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LONRF3Q496Y0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LONRF3Q496Y0 RNU6-653P-201ENST00000363074 106 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 RNU6-112P-201ENST00000363599 104 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 RNU4-13P-201ENST00000364019 141 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 MT-TR-201ENST00000387439 65 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 RNU2-64P-201ENST00000411315 191 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 RPL31P63-201ENST00000422565 375 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 CST2P1-201ENST00000425770 87 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 AL445646.1-201ENST00000431784 216 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 AL138752.1-201ENST00000452964 351 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 snoU13.23-201ENST00000458863 104 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.26□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 SNORA81.3-201ENST00000517283 198 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.26□□□□□ -2.05
LONRF3Q496Y0 POLR3GP1-201ENST00000594073 261 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 AC073413.2-201ENST00000604332 360 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 AP003357.1-201ENST00000604497 148 ntBASIC2.26□□□□□ -2.05
LONRF3Q496Y0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LONRF3Q496Y0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LONRF3Q496Y0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 RNU6-923P-201ENST00000364753 107 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.293-201ENST00000364908 93 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.308-201ENST00000365043 101 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.25□□□□□ -2.05
LONRF3Q496Y0 RNU1-142P-201ENST00000516682 145 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 RNU7-116P-201ENST00000516940 62 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 CBX3P4-201ENST00000538909 354 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 AC084364.2-201ENST00000546924 395 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 Z83818.1-201ENST00000603584 150 ntBASIC2.25□□□□□ -2.05
LONRF3Q496Y0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.25□□□□□ -2.05
LONRF3Q496Y0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LONRF3Q496Y0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LONRF3Q496Y0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LONRF3Q496Y0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 MIR30A-201ENST00000385092 71 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 SNORA36B-201ENST00000410438 131 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.24□□□□□ -2.05
LONRF3Q496Y0 RNU6-237P-201ENST00000515985 71 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.24□□□□□ -2.05
LONRF3Q496Y0 AC100767.1-201ENST00000528178 123 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 AC127455.1-201ENST00000565496 145 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.24□□□□□ -2.05
LONRF3Q496Y0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LONRF3Q496Y0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
LONRF3Q496Y0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.23□□□□□ -2.05
LONRF3Q496Y0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RNU6-661P-201ENST00000362409 107 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RNU6-414P-201ENST00000363705 104 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RNU4-10P-201ENST00000364383 140 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RNU6-47P-201ENST00000383866 107 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RNU6-439P-201ENST00000384188 106 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 MIR515-2-201ENST00000384883 83 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 MIR515-1-201ENST00000384884 83 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RNU6-493P-201ENST00000391321 108 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 MIR934-201ENST00000401241 83 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 AC069257.2-201ENST00000441819 155 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RPS4XP11-201ENST00000446897 772 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms