Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.8□□□□□ -2.28
RFX4Q33E94 AC027279.3-201ENST00000625055 122 ntBASIC0.8□□□□□ -2.28
RFX4Q33E94 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RFX4Q33E94 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.79□□□□□ -2.28
RFX4Q33E94 Y_RNA.230-201ENST00000364348 109 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 RNU6-1175P-201ENST00000365200 107 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 Y_RNA.329-201ENST00000365209 107 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 AC002429.1-201ENST00000437672 148 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.79□□□□□ -2.28
RFX4Q33E94 RPS20P10-201ENST00000451209 253 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 SNORD111.1-201ENST00000516421 86 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 AL357312.1-201ENST00000603879 298 ntBASIC0.79□□□□□ -2.28
RFX4Q33E94 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RFX4Q33E94 Y_RNA.5-201ENST00000362334 102 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 SNORD81.1-201ENST00000363064 77 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 Y_RNA.187-201ENST00000363918 113 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 MIR522-201ENST00000385071 87 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 MIR1298-201ENST00000408783 112 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.78□□□□□ -2.28
RFX4Q33E94 RPL39P39-201ENST00000455840 151 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 SNORD124-201ENST00000459577 104 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.78□□□□□ -2.28
RFX4Q33E94 RNU4-77P-201ENST00000516692 156 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 SNORD116.3-201ENST00000517176 78 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 RN7SKP295-201ENST00000517264 153 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 MIR5188-201ENST00000583467 113 ntBASIC0.78□□□□□ -2.28
RFX4Q33E94 Y_RNA.58-201ENST00000362807 102 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 Y_RNA.70-201ENST00000362886 110 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 Y_RNA.154-201ENST00000363624 102 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 RNY3P1-201ENST00000365085 102 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 RNY3-201ENST00000365484 102 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 RNU6-969P-201ENST00000383900 105 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 Y_RNA.428-201ENST00000384078 102 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 MIR516B2-201ENST00000385190 85 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 SNORA75.2-201ENST00000391138 150 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 SNORA75.3-201ENST00000391231 150 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AL590004.1-201ENST00000405321 300 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 MCFD2P1-201ENST00000417812 300 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 LINC01399-202ENST00000458450 244 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AC010655.3-201ENST00000478818 450 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.77□□□□□ -2.29
RFX4Q33E94 MIR4781-201ENST00000585250 76 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AC092447.9-201ENST00000603395 144 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AC005972.2-201ENST00000604690 348 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 RBM11P1-201ENST00000604951 799 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 PRELID3BP2-201ENST00000605362 201 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 SNORD58B-201ENST00000607313 66 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AL391903.3-201ENST00000612158 163 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AC010205.1-201ENST00000616668 449 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 AC112487.2-201ENST00000637950 304 ntBASIC0.77□□□□□ -2.29
RFX4Q33E94 Y_RNA.80-201ENST00000362996 102 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 Y_RNA.263-201ENST00000364659 114 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 Y_RNA.315-201ENST00000365117 102 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 Y_RNA.458-201ENST00000384240 102 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 Y_RNA.485-201ENST00000384395 102 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 RNU6-1105P-201ENST00000384774 107 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 SNORD12-201ENST00000391002 90 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 MTCO2P27-201ENST00000420740 428 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.76□□□□□ -2.29
RFX4Q33E94 DEFB117-201ENST00000602356 141 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 AC211469.2-201ENST00000605461 205 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
RFX4Q33E94 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.76□□□□□ -2.29
RFX4Q33E94 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
RFX4Q33E94 Y_RNA.310-201ENST00000365063 113 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 Y_RNA.356-201ENST00000365475 113 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 SNORA72-201ENST00000384339 132 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 MIR452-201ENST00000385020 85 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 RNU6-855P-201ENST00000410395 104 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 MLLT10P1-201ENST00000418346 262 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 MTND1P14-201ENST00000427400 950 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.75□□□□□ -2.29
RFX4Q33E94 AC245047.8-201ENST00000456455 284 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 Y_RNA.661-201ENST00000516003 99 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 AC090142.3-201ENST00000519012 385 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
RFX4Q33E94 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
RFX4Q33E94 SNORD114-27-201ENST00000363766 70 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 Y_RNA.252-201ENST00000364556 101 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 SNORD50B-201ENST00000364995 70 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AC117470.1-201ENST00000381974 330 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 RNY3P14-201ENST00000384309 102 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 SNORA80D-201ENST00000384488 135 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AL390729.2-201ENST00000416137 156 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 SNRPGP10-201ENST00000432323 225 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.74□□□□□ -2.29
RFX4Q33E94 AC005042.3-201ENST00000453230 174 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 RNU7-21P-201ENST00000459430 62 ntBASIC0.74□□□□□ -2.29
RFX4Q33E94 SNORD45.4-201ENST00000516629 73 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms