Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RNU1-97P-201ENST00000516872 164 ntBASIC1.73□□□□□ -2.13
EFNB3Q15768 RNU6-111P-201ENST00000517179 105 ntBASIC1.73□□□□□ -2.13
EFNB3Q15768 AC011604.1-201ENST00000545978 196 ntBASIC1.73□□□□□ -2.13
EFNB3Q15768 MIR5692C2-201ENST00000577959 77 ntBASIC1.73□□□□□ -2.13
EFNB3Q15768 MIR4448-201ENST00000584360 86 ntBASIC1.73□□□□□ -2.13
EFNB3Q15768 MIR5002-201ENST00000584713 97 ntBASIC1.73□□□□□ -2.13
EFNB3Q15768 AC073349.3-201ENST00000617616 186 ntBASIC1.73□□□□□ -2.13
EFNB3Q15768 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
EFNB3Q15768 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
EFNB3Q15768 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
EFNB3Q15768 RNU6-1205P-201ENST00000363625 106 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 Y_RNA.267-201ENST00000364679 109 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 Y_RNA.515-201ENST00000384535 112 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 MIR1289-2-201ENST00000408360 111 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 SNORA36B-201ENST00000410438 131 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 RNU6-847P-201ENST00000411115 108 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 AL139156.1-201ENST00000412785 841 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 RPL23AP54-201ENST00000495129 419 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 RPL23AP63-201ENST00000498752 471 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 RNU6-1291P-201ENST00000516591 104 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 RNU2-56P-201ENST00000516826 190 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 RNA5SP437-201ENST00000517249 129 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 MIR4643-201ENST00000577473 78 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 AL773524.1-201ENST00000614065 229 ntBASIC1.72□□□□□ -2.13
EFNB3Q15768 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
EFNB3Q15768 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
EFNB3Q15768 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
EFNB3Q15768 AC244636.1-201ENST00000421152 228 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AL606517.2-201ENST00000442855 241 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AC233266.1-201ENST00000454518 96 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 snoU13.23-201ENST00000458863 104 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 Y_RNA.638-201ENST00000459374 113 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 RNU7-28P-201ENST00000516759 62 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
EFNB3Q15768 MIR3124-201ENST00000582636 67 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AC242852.1-201ENST00000612151 96 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AL442067.1-201ENST00000613261 223 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AC141273.2-201ENST00000618989 130 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 MIR8054-201ENST00000620877 86 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AC244015.1-201ENST00000622301 99 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 AC134026.1-201ENST00000623249 2239 ntBASIC1.71□□□□□ -2.14
EFNB3Q15768 Y_RNA.76-201ENST00000362931 109 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 RNU6-674P-201ENST00000363831 107 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 RNY1-201ENST00000364228 113 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 Y_RNA.269-201ENST00000364685 89 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 RNA5SP138-201ENST00000365098 114 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 RN7SKP200-201ENST00000410564 320 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 RNU6-651P-201ENST00000411040 105 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 Y_RNA.621-201ENST00000411065 96 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 RNU6-437P-201ENST00000459408 95 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.7□□□□□ -2.14
EFNB3Q15768 SNORA31.17-201ENST00000516953 127 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 DEFB122-202ENST00000569013 197 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
EFNB3Q15768 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 SNORA28-201ENST00000606769 126 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 AC090425.1-201ENST00000610007 140 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 AC078938.1-201ENST00000620993 318 ntBASIC1.7□□□□□ -2.14
EFNB3Q15768 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
EFNB3Q15768 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.69□□□□□ -2.14
EFNB3Q15768 SNORA1B-201ENST00000362535 133 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 Y_RNA.292-201ENST00000364904 97 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 Y_RNA.304-201ENST00000365011 112 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 U8.13-201ENST00000390842 128 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 RNU6-440P-201ENST00000390882 105 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 RNA5SP338-201ENST00000410495 85 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.69□□□□□ -2.14
EFNB3Q15768 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.69□□□□□ -2.14
EFNB3Q15768 AL049830.1-201ENST00000468034 425 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 COX6CP14-201ENST00000469580 174 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 AC022254.1-201ENST00000567857 235 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 MIR5688-201ENST00000580619 83 ntBASIC1.69□□□□□ -2.14
EFNB3Q15768 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
EFNB3Q15768 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.68□□□□□ -2.14
EFNB3Q15768 Y_RNA.203-201ENST00000364106 102 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 Y_RNA.257-201ENST00000364596 102 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 Y_RNA.293-201ENST00000364908 93 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 MIR526A2-201ENST00000390198 65 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 RNU6-360P-201ENST00000390944 104 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 RNA5SP482-201ENST00000391269 118 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 COX6CP10-201ENST00000416832 224 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 FTH1P12-201ENST00000432137 551 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 snoU13.27-201ENST00000459278 104 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 SNORA31.10-201ENST00000516482 106 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 MIR4709-201ENST00000577272 72 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 MIR2681-201ENST00000581814 105 ntBASIC1.68□□□□□ -2.14
EFNB3Q15768 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.68□□□□□ -2.14
EFNB3Q15768 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
EFNB3Q15768 Y_RNA.265-201ENST00000364677 108 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 RNY4P28-201ENST00000365281 93 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 SNORA4.2-201ENST00000365313 147 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 225.9 ms