Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU11-5P-201ENST00000391216 129 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 OOSP1P1-201ENST00000423265 274 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 AL162725.1-201ENST00000435405 301 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 AC069257.2-201ENST00000441819 155 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 RPS20P10-201ENST00000451209 253 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.19□□□□□ -2.22
CKAP4Q07065 snoU13.9-201ENST00000458927 103 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 DEFB108E-201ENST00000524692 240 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.19□□□□□ -2.22
CKAP4Q07065 AC022217.4-201ENST00000604389 163 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 AC004832.4-201ENST00000608952 331 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 U4.1-201ENST00000620349 87 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 7SK.10-201ENST00000621414 298 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 U6.104-201ENST00000637979 90 ntBASIC1.19□□□□□ -2.22
CKAP4Q07065 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CKAP4Q07065 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CKAP4Q07065 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
CKAP4Q07065 AL391987.6-201ENST00000305671 199 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 RNU6-801P-201ENST00000364087 105 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 Y_RNA.562-201ENST00000384695 113 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 MIR520A-201ENST00000384862 85 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 MIR513A1-201ENST00000385138 129 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CKAP4Q07065 RNU6-855P-201ENST00000410395 104 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 RNA5SP511-201ENST00000410487 115 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.18□□□□□ -2.22
CKAP4Q07065 AL606517.2-201ENST00000442855 241 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 AC245517.4-201ENST00000448601 281 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 SNORD127-201ENST00000458892 86 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 RNU7-94P-201ENST00000459576 63 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 RNA5SP445-201ENST00000515889 115 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 SNORA27.4-201ENST00000516650 95 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 RNU6-63P-201ENST00000516690 95 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 RNU6-341P-201ENST00000516973 96 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 RNA5SP437-201ENST00000517249 129 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 AC136628.3-201ENST00000521868 290 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.18□□□□□ -2.22
CKAP4Q07065 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.18□□□□□ -2.22
CKAP4Q07065 MIR6079-201ENST00000635807 62 ntBASIC1.18□□□□□ -2.22
CKAP4Q07065 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CKAP4Q07065 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.17□□□□□ -2.22
CKAP4Q07065 Y_RNA.193-201ENST00000363979 102 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 Y_RNA.217-201ENST00000364214 105 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 Y_RNA.341-201ENST00000365341 102 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 RNU6-1323P-201ENST00000384025 107 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 MIR520G-201ENST00000385064 90 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 Y_RNA.641-201ENST00000459414 105 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.17□□□□□ -2.22
CKAP4Q07065 AC091959.1-201ENST00000495857 238 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 SNORA31.17-201ENST00000516953 127 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 RPL21P9-201ENST00000556149 474 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
CKAP4Q07065 AC005972.2-201ENST00000604690 348 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 AC037487.3-201ENST00000606668 112 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CKAP4Q07065 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.17□□□□□ -2.22
CKAP4Q07065 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.17□□□□□ -2.22
CKAP4Q07065 SNORA25.1-201ENST00000362326 128 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 Y_RNA.14-201ENST00000362415 103 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 Y_RNA.288-201ENST00000364854 92 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 SNORA72.4-201ENST00000384174 132 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 RNU6-574P-201ENST00000384265 107 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 RNU6-376P-201ENST00000384731 106 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 MIR562-201ENST00000384894 95 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 RNA5SP109-201ENST00000391010 116 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 RPS4XP11-201ENST00000446897 772 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 RNU6-1132P-201ENST00000459214 107 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 AC091021.1-201ENST00000468051 388 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 SNORA31.10-201ENST00000516482 106 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 AL358944.1-201ENST00000528537 144 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 AC004817.2-201ENST00000561794 651 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 MIR3149-201ENST00000584629 83 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 AC012433.1-201ENST00000588916 398 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 AC103810.9-201ENST00000606688 112 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 U2.14-201ENST00000615943 113 ntBASIC1.16□□□□□ -2.22
CKAP4Q07065 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CKAP4Q07065 AC100821.1-201ENST00000523153 2479 ntBASIC1.15□□□□□ -2.22
CKAP4Q07065 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CKAP4Q07065 Y_RNA.275-201ENST00000364726 110 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNU6-702P-201ENST00000364982 107 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNU6-514P-201ENST00000384208 107 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 SNORA26.5-201ENST00000391215 123 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNU2-38P-201ENST00000410856 79 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNU2-14P-201ENST00000411053 191 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.15□□□□□ -2.23
CKAP4Q07065 AC104332.1-201ENST00000440471 797 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 Y_RNA.637-201ENST00000459424 114 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 MTND1P19-201ENST00000511780 315 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNU7-115P-201ENST00000516433 55 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNA5SP481-201ENST00000516814 122 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 SCARNA24.2-201ENST00000516968 130 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 RNU6-1096P-201ENST00000517089 102 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 AL512605.2-201ENST00000592972 256 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 AP003357.1-201ENST00000604497 148 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 AC062037.2-201ENST00000610137 73 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 MIR8054-201ENST00000620877 86 ntBASIC1.15□□□□□ -2.23
CKAP4Q07065 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms