Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RPS27P22-201ENST00000478056 241 ntBASIC1.98□□□□□ -2.09
LTBQ06643 POLR3GP1-201ENST00000594073 261 ntBASIC1.98□□□□□ -2.09
LTBQ06643 AP003357.1-201ENST00000604497 148 ntBASIC1.98□□□□□ -2.09
LTBQ06643 AC005972.2-201ENST00000604690 348 ntBASIC1.98□□□□□ -2.09
LTBQ06643 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
LTBQ06643 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LTBQ06643 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.98□□□□□ -2.09
LTBQ06643 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LTBQ06643 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LTBQ06643 RNU6-103P-201ENST00000363686 107 ntBASIC1.97□□□□□ -2.09
LTBQ06643 RNU4-84P-201ENST00000364200 139 ntBASIC1.97□□□□□ -2.09
LTBQ06643 Y_RNA.229-201ENST00000364347 113 ntBASIC1.97□□□□□ -2.09
LTBQ06643 SNORA25B-201ENST00000365507 128 ntBASIC1.97□□□□□ -2.09
LTBQ06643 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.97□□□□□ -2.09
LTBQ06643 RNU6-144P-201ENST00000383951 107 ntBASIC1.97□□□□□ -2.09
LTBQ06643 SNORD116-18-201ENST00000383961 92 ntBASIC1.97□□□□□ -2.09
LTBQ06643 RNU6-1323P-201ENST00000384025 107 ntBASIC1.97□□□□□ -2.09
LTBQ06643 MIR524-201ENST00000385242 87 ntBASIC1.97□□□□□ -2.09
LTBQ06643 MIR518E-201ENST00000385252 88 ntBASIC1.97□□□□□ -2.09
LTBQ06643 Y_RNA.580-201ENST00000391004 95 ntBASIC1.97□□□□□ -2.09
LTBQ06643 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
LTBQ06643 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.97□□□□□ -2.09
LTBQ06643 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
LTBQ06643 RNU6-561P-201ENST00000516222 102 ntBASIC1.97□□□□□ -2.09
LTBQ06643 RNU6-856P-201ENST00000516959 98 ntBASIC1.97□□□□□ -2.09
LTBQ06643 AC127455.1-201ENST00000565496 145 ntBASIC1.97□□□□□ -2.09
LTBQ06643 MIR4724-201ENST00000579485 89 ntBASIC1.97□□□□□ -2.09
LTBQ06643 AC012640.5-201ENST00000623897 319 ntBASIC1.97□□□□□ -2.09
LTBQ06643 AC006435.5-201ENST00000624486 112 ntBASIC1.97□□□□□ -2.09
LTBQ06643 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
LTBQ06643 RNU1-22P-201ENST00000363334 158 ntBASIC1.96□□□□□ -2.1
LTBQ06643 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
LTBQ06643 SNORA19-201ENST00000384737 128 ntBASIC1.96□□□□□ -2.1
LTBQ06643 MIR616-201ENST00000385293 97 ntBASIC1.96□□□□□ -2.1
LTBQ06643 EBAG9P1-201ENST00000418955 543 ntBASIC1.96□□□□□ -2.1
LTBQ06643 AL162725.1-201ENST00000435405 301 ntBASIC1.96□□□□□ -2.1
LTBQ06643 AC090255.1-201ENST00000495779 349 ntBASIC1.96□□□□□ -2.1
LTBQ06643 SNORA4.4-201ENST00000515921 135 ntBASIC1.96□□□□□ -2.1
LTBQ06643 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
LTBQ06643 RNU6-1007P-201ENST00000516586 107 ntBASIC1.96□□□□□ -2.1
LTBQ06643 AC109810.1-201ENST00000534066 224 ntBASIC1.96□□□□□ -2.1
LTBQ06643 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.96□□□□□ -2.1
LTBQ06643 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.96□□□□□ -2.1
LTBQ06643 MIR4438-201ENST00000585271 93 ntBASIC1.96□□□□□ -2.1
LTBQ06643 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LTBQ06643 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
LTBQ06643 MIR367-201ENST00000362299 68 ntBASIC1.95□□□□□ -2.1
LTBQ06643 SNORD114-6-201ENST00000364393 72 ntBASIC1.95□□□□□ -2.1
LTBQ06643 Y_RNA.357-201ENST00000365487 109 ntBASIC1.95□□□□□ -2.1
LTBQ06643 MIR1278-201ENST00000408753 81 ntBASIC1.95□□□□□ -2.1
LTBQ06643 RPL23AP54-201ENST00000495129 419 ntBASIC1.95□□□□□ -2.1
LTBQ06643 MIR5688-201ENST00000580619 83 ntBASIC1.95□□□□□ -2.1
LTBQ06643 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
LTBQ06643 snoU13.31-201ENST00000607291 104 ntBASIC1.95□□□□□ -2.1
LTBQ06643 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LTBQ06643 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LTBQ06643 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LTBQ06643 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LTBQ06643 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LTBQ06643 Y_RNA.116-201ENST00000363292 103 ntBASIC1.94□□□□□ -2.1
LTBQ06643 SNORA25.9-201ENST00000365087 128 ntBASIC1.94□□□□□ -2.1
LTBQ06643 RNU6-449P-201ENST00000383914 107 ntBASIC1.94□□□□□ -2.1
LTBQ06643 MIR7-2-201ENST00000384970 110 ntBASIC1.94□□□□□ -2.1
LTBQ06643 MIR1262-201ENST00000408276 93 ntBASIC1.94□□□□□ -2.1
LTBQ06643 AC108667.1-201ENST00000428618 249 ntBASIC1.94□□□□□ -2.1
LTBQ06643 RPS4XP11-201ENST00000446897 772 ntBASIC1.94□□□□□ -2.1
LTBQ06643 snoU13.18-201ENST00000459483 104 ntBASIC1.94□□□□□ -2.1
LTBQ06643 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.94□□□□□ -2.1
LTBQ06643 AC097462.1-201ENST00000514125 324 ntBASIC1.94□□□□□ -2.1
LTBQ06643 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
LTBQ06643 RNU7-116P-201ENST00000516940 62 ntBASIC1.94□□□□□ -2.1
LTBQ06643 MIR4431-201ENST00000579990 94 ntBASIC1.94□□□□□ -2.1
LTBQ06643 AL929325.1-201ENST00000603096 117 ntBASIC1.94□□□□□ -2.1
LTBQ06643 SNORD14A-201ENST00000606526 91 ntBASIC1.94□□□□□ -2.1
LTBQ06643 MIR8070-201ENST00000616510 88 ntBASIC1.94□□□□□ -2.1
LTBQ06643 U6.73-201ENST00000619194 103 ntBASIC1.94□□□□□ -2.1
LTBQ06643 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LTBQ06643 RNU1-148P-201ENST00000384472 162 ntBASIC1.93□□□□□ -2.1
LTBQ06643 RNU6-417P-201ENST00000384712 107 ntBASIC1.93□□□□□ -2.1
LTBQ06643 MIR613-201ENST00000385248 95 ntBASIC1.93□□□□□ -2.1
LTBQ06643 U8.13-201ENST00000390842 128 ntBASIC1.93□□□□□ -2.1
LTBQ06643 RNU6-239P-201ENST00000390990 99 ntBASIC1.93□□□□□ -2.1
LTBQ06643 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
LTBQ06643 AL606845.1-201ENST00000404881 255 ntBASIC1.93□□□□□ -2.1
LTBQ06643 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
LTBQ06643 HMGN2P34-201ENST00000437647 269 ntBASIC1.93□□□□□ -2.1
LTBQ06643 RNU6-437P-201ENST00000459408 95 ntBASIC1.93□□□□□ -2.1
LTBQ06643 AC005840.1-201ENST00000498412 377 ntBASIC1.93□□□□□ -2.1
LTBQ06643 AC011406.1-201ENST00000512440 370 ntBASIC1.93□□□□□ -2.1
LTBQ06643 RNU6-1041P-201ENST00000516254 102 ntBASIC1.93□□□□□ -2.1
LTBQ06643 SNORD116-25-201ENST00000516517 92 ntBASIC1.93□□□□□ -2.1
LTBQ06643 RNU7-121P-201ENST00000516604 62 ntBASIC1.93□□□□□ -2.1
LTBQ06643 RNU7-172P-201ENST00000517125 64 ntBASIC1.93□□□□□ -2.1
LTBQ06643 NDUFA5P6-201ENST00000542110 379 ntBASIC1.93□□□□□ -2.1
LTBQ06643 AL391903.3-201ENST00000612158 163 ntBASIC1.93□□□□□ -2.1
LTBQ06643 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.93□□□□□ -2.1
LTBQ06643 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.92□□□□□ -2.1
LTBQ06643 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LTBQ06643 RNU6-674P-201ENST00000363831 107 ntBASIC1.92□□□□□ -2.1
LTBQ06643 RNU4-13P-201ENST00000364019 141 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 280.7 ms