Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC244250.2-201ENST00000418731 148 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 UBL5P4-201ENST00000562584 236 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 AC125232.2-201ENST00000592457 143 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 AC134878.1-201ENST00000619901 243 ntBASIC-1.1□□□□□ -2.59
HIST1H1AQ02539 SNORD114-7-201ENST00000362520 77 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 SNORD114-14-201ENST00000362723 75 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 SNORA75.4-201ENST00000391278 119 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 SNORA3B-201ENST00000391305 131 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 RNU6-847P-201ENST00000411115 108 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 Z82188.1-201ENST00000436709 154 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 RNU2-13P-201ENST00000515909 113 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 RNU7-181P-201ENST00000517234 74 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 AC104576.1-201ENST00000524225 88 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 AL137161.1-201ENST00000532231 390 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 MIR378D2-201ENST00000580636 98 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 AC009248.2-201ENST00000619826 254 ntBASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.11□□□□□ -2.59
HIST1H1AQ02539 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 RNU6-157P-201ENST00000383957 107 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 MIR1-2-201ENST00000384961 85 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 SNORA25.10-201ENST00000515926 124 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 AP001328.1-201ENST00000528550 176 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 MIR3681-201ENST00000580089 72 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 SNORA70.25-201ENST00000612741 95 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 U6.115-201ENST00000636045 103 ntBASIC-1.12□□□□□ -2.59
HIST1H1AQ02539 RNU4-68P-201ENST00000364314 141 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 SNORA1.2-201ENST00000365189 134 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 RNU6-541P-201ENST00000384709 110 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 RNU2-29P-201ENST00000410423 189 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 FCF1P9-201ENST00000412546 282 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 SSR1P2-201ENST00000415208 787 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 AL138752.1-201ENST00000452964 351 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 RNU6-138P-201ENST00000515952 107 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 SCARNA1-201ENST00000517138 166 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 IGKV1-22-201ENST00000524313 326 ntBASIC-1.13□□□□□ -2.59
HIST1H1AQ02539 SNORD14E-201ENST00000364009 85 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 RNA5SP205-201ENST00000364653 136 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 RNU6-740P-201ENST00000364734 105 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 MT-TF-201ENST00000387314 71 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 AL590002.1-201ENST00000406554 418 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 RNU6-325P-201ENST00000411132 105 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 USP9YP12-201ENST00000450481 570 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 U8.19-201ENST00000459095 133 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 U8.22-201ENST00000459141 133 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 snoU13.16-201ENST00000459350 104 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 AC105029.1-201ENST00000520250 669 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 AC022616.4-201ENST00000522985 181 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 LRRC34P1-201ENST00000542742 915 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 CPDP1-201ENST00000579660 283 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 AC005828.6-201ENST00000606610 232 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 AC006566.1-201ENST00000608943 513 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 AC072046.2-201ENST00000618366 268 ntBASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.14□□□□□ -2.59
HIST1H1AQ02539 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 SNORD38B-201ENST00000384690 67 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 RNY1P7-201ENST00000384743 110 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 MIR635-201ENST00000384830 98 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 RNU4-83P-201ENST00000410863 133 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 MTCO1P20-201ENST00000425366 358 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 snoU13.2-201ENST00000459201 104 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 AL157687.1-201ENST00000554853 619 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 AL355297.3-201ENST00000604082 446 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 AC027807.2-201ENST00000616099 408 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 AC023510.2-201ENST00000622162 746 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.15□□□□□ -2.59
HIST1H1AQ02539 MIR101-2-201ENST00000362195 79 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 RNU6-324P-201ENST00000363957 106 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 RPL30P16-201ENST00000419341 429 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 MTATP6P26-201ENST00000445926 662 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 AC069431.2-201ENST00000604149 1099 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 MIR6507-201ENST00000613630 70 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 AC010205.1-201ENST00000616668 449 ntBASIC-1.16□□□□□ -2.6
HIST1H1AQ02539 ZNF299P-201ENST00000406845 1804 ntBASIC-1.17□□□□□ -2.6
HIST1H1AQ02539 MIR30D-201ENST00000362283 70 ntBASIC-1.17□□□□□ -2.6
HIST1H1AQ02539 SNORD50.1-201ENST00000362987 71 ntBASIC-1.17□□□□□ -2.6
HIST1H1AQ02539 HMGN1P33-201ENST00000432945 451 ntBASIC-1.17□□□□□ -2.6
HIST1H1AQ02539 AC107297.1-201ENST00000459991 176 ntBASIC-1.17□□□□□ -2.6
HIST1H1AQ02539 AC010424.1-201ENST00000506336 297 ntBASIC-1.17□□□□□ -2.6
HIST1H1AQ02539 MIR5583-1-201ENST00000580941 59 ntBASIC-1.17□□□□□ -2.6
HIST1H1AQ02539 MTCO3P40-201ENST00000392516 676 ntBASIC-1.18□□□□□ -2.6
HIST1H1AQ02539 MIR876-201ENST00000401147 81 ntBASIC-1.18□□□□□ -2.6
HIST1H1AQ02539 MIR548L-201ENST00000408303 86 ntBASIC-1.18□□□□□ -2.6
HIST1H1AQ02539 SNORD93-201ENST00000408813 74 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms