Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MTCO2P6-201ENST00000463134 685 ntBASIC-1.27□□□□□ -2.61
SCN7AQ01118 RPL7P42-201ENST00000481005 679 ntBASIC-1.27□□□□□ -2.61
SCN7AQ01118 RNU6-475P-201ENST00000516073 104 ntBASIC-1.27□□□□□ -2.61
SCN7AQ01118 MTND2P32-201ENST00000521584 1038 ntBASIC-1.27□□□□□ -2.61
SCN7AQ01118 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.27□□□□□ -2.61
SCN7AQ01118 AC069431.2-201ENST00000604149 1099 ntBASIC-1.27□□□□□ -2.61
SCN7AQ01118 MIR6740-201ENST00000618268 113 ntBASIC-1.27□□□□□ -2.61
SCN7AQ01118 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.28□□□□□ -2.61
SCN7AQ01118 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.28□□□□□ -2.61
SCN7AQ01118 MIR516B1-201ENST00000385211 90 ntBASIC-1.28□□□□□ -2.61
SCN7AQ01118 SNORD93-201ENST00000408813 74 ntBASIC-1.28□□□□□ -2.61
SCN7AQ01118 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.28□□□□□ -2.61
SCN7AQ01118 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.28□□□□□ -2.61
SCN7AQ01118 AL157687.1-201ENST00000554853 619 ntBASIC-1.28□□□□□ -2.61
SCN7AQ01118 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 RNU6-117P-201ENST00000365415 107 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC090844.1-201ENST00000422019 156 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 AL137792.2-201ENST00000443484 235 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 U8.19-201ENST00000459095 133 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 U8.22-201ENST00000459141 133 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC116353.3-201ENST00000511215 249 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 RNU6-881P-201ENST00000516813 102 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 MIR4441-201ENST00000582623 100 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 RMST_3.1-201ENST00000611651 109 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 U4.2-201ENST00000618561 85 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 U6.114-201ENST00000636407 96 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 RNY1P12-201ENST00000364251 105 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 MIR873-201ENST00000401120 77 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC022418.1-201ENST00000624118 445 ntBASIC-1.29□□□□□ -2.62
SCN7AQ01118 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.29□□□□□ -2.62
SCN7AQ01118 AC010332.2-201ENST00000613083 1904 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 RNU6-535P-201ENST00000384722 107 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 RNU6-131P-201ENST00000391144 107 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 SSR1P2-201ENST00000415208 787 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 AL354751.2-201ENST00000415471 210 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.3□□□□□ -2.62
SCN7AQ01118 AC093303.1-201ENST00000514549 295 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 SNORA18.4-201ENST00000516440 124 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 RNU6-612P-201ENST00000516909 102 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 Z94722.1-201ENST00000604328 474 ntBASIC-1.3□□□□□ -2.62
SCN7AQ01118 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.31□□□□□ -2.62
SCN7AQ01118 RNU6-715P-201ENST00000365204 103 ntBASIC-1.31□□□□□ -2.62
SCN7AQ01118 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
SCN7AQ01118 RNU6-550P-201ENST00000391057 101 ntBASIC-1.31□□□□□ -2.62
SCN7AQ01118 AC011352.1-201ENST00000512300 793 ntBASIC-1.31□□□□□ -2.62
SCN7AQ01118 RN7SKP19-201ENST00000516016 252 ntBASIC-1.31□□□□□ -2.62
SCN7AQ01118 AC022784.5-201ENST00000522241 437 ntBASIC-1.31□□□□□ -2.62
SCN7AQ01118 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.31□□□□□ -2.62
SCN7AQ01118 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.31□□□□□ -2.62
SCN7AQ01118 RNU6-47P-201ENST00000383866 107 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 RNU6-784P-201ENST00000384330 106 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 RNU6-24P-201ENST00000384440 107 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 SNORD70.1-201ENST00000391007 85 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 ELOCP4-201ENST00000420090 333 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.32□□□□□ -2.62
SCN7AQ01118 SNRPGP10-201ENST00000432323 225 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 RNU2-11P-201ENST00000459191 187 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 MTCO3P38-201ENST00000468910 766 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 AF186996.7-201ENST00000492781 209 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 AC022616.6-201ENST00000520479 119 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 AC018462.2-201ENST00000605375 395 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 AL121757.2-201ENST00000611223 313 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 SNORA70.25-201ENST00000612741 95 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 AC023510.2-201ENST00000622162 746 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 AC018865.2-201ENST00000423631 129 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 MIR4280-201ENST00000582178 76 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 uc_338.10-201ENST00000621872 182 ntBASIC-1.32□□□□□ -2.62
SCN7AQ01118 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.32□□□□□ -2.62
SCN7AQ01118 RNU6-727P-201ENST00000363592 107 ntBASIC-1.33□□□□□ -2.62
SCN7AQ01118 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.33□□□□□ -2.62
SCN7AQ01118 MT-TY-201ENST00000387409 66 ntBASIC-1.33□□□□□ -2.62
SCN7AQ01118 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.33□□□□□ -2.62
SCN7AQ01118 AC091959.1-201ENST00000495857 238 ntBASIC-1.33□□□□□ -2.62
SCN7AQ01118 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.33□□□□□ -2.62
SCN7AQ01118 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
SCN7AQ01118 AC073464.1-201ENST00000429823 534 ntBASIC-1.34□□□□□ -2.62
SCN7AQ01118 SNORA13-201ENST00000458790 133 ntBASIC-1.34□□□□□ -2.62
SCN7AQ01118 AC022616.4-201ENST00000522985 181 ntBASIC-1.34□□□□□ -2.62
SCN7AQ01118 AP003168.1-201ENST00000530091 307 ntBASIC-1.34□□□□□ -2.62
SCN7AQ01118 AC073648.5-201ENST00000603502 305 ntBASIC-1.34□□□□□ -2.62
SCN7AQ01118 AC006441.5-201ENST00000612680 209 ntBASIC-1.34□□□□□ -2.62
SCN7AQ01118 RNU6-442P-201ENST00000383968 104 ntBASIC-1.35□□□□□ -2.63
SCN7AQ01118 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.35□□□□□ -2.63
SCN7AQ01118 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.35□□□□□ -2.63
SCN7AQ01118 MIR588-201ENST00000384900 83 ntBASIC-1.35□□□□□ -2.63
SCN7AQ01118 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.35□□□□□ -2.63
SCN7AQ01118 RNU6-602P-201ENST00000411155 105 ntBASIC-1.35□□□□□ -2.63
SCN7AQ01118 RNU6-334P-201ENST00000517072 102 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms