Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.62□□□□□ -1.99
HERVK_113P62684 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HERVK_113P62684 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HERVK_113P62684 VTRNA1-1-201ENST00000363120 99 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 Y_RNA.203-201ENST00000364106 102 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 RNU6-818P-201ENST00000364837 108 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 RNU6-643P-201ENST00000384018 107 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 MIR221-201ENST00000385135 110 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 RNU6-482P-201ENST00000391068 107 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 RNA5SP323-201ENST00000391094 133 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 ATP5J2P3-201ENST00000451550 258 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 AC233266.1-201ENST00000454518 96 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.61□□□□□ -1.99
HERVK_113P62684 AC242852.1-201ENST00000612151 96 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 AC244015.1-201ENST00000622301 99 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 MIR338-201ENST00000636369 67 ntBASIC2.61□□□□□ -1.99
HERVK_113P62684 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
HERVK_113P62684 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HERVK_113P62684 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HERVK_113P62684 Y_RNA.215-201ENST00000364204 112 ntBASIC2.6□□□□□ -1.99
HERVK_113P62684 RNA5SP496-201ENST00000391240 109 ntBASIC2.6□□□□□ -1.99
HERVK_113P62684 AL606753.1-201ENST00000427435 87 ntBASIC2.6□□□□□ -1.99
HERVK_113P62684 RNU7-99P-201ENST00000516271 62 ntBASIC2.6□□□□□ -1.99
HERVK_113P62684 RPL23AP91-201ENST00000569211 455 ntBASIC2.6□□□□□ -1.99
HERVK_113P62684 AL359075.3-201ENST00000613288 217 ntBASIC2.6□□□□□ -1.99
HERVK_113P62684 MIR3658-201ENST00000636291 56 ntBASIC2.6□□□□□ -1.99
HERVK_113P62684 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
HERVK_113P62684 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HERVK_113P62684 RNU1-96P-201ENST00000364163 162 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 RNU4-11P-201ENST00000365287 132 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 Y_RNA.337-201ENST00000365312 102 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 RNY3P5-201ENST00000384127 102 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 SNORA67.3-201ENST00000384366 140 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 Y_RNA.521-201ENST00000384560 114 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 AL353689.1-201ENST00000438895 199 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.59□□□□□ -1.99
HERVK_113P62684 AC245102.2-201ENST00000448956 180 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 RNU1-142P-201ENST00000516682 145 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.59□□□□□ -1.99
HERVK_113P62684 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.59□□□□□ -1.99
HERVK_113P62684 AC026271.5-201ENST00000577873 130 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 AC022202.1-201ENST00000613515 211 ntBASIC2.59□□□□□ -1.99
HERVK_113P62684 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
HERVK_113P62684 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.58□□□□□ -2
HERVK_113P62684 RNU6-199P-201ENST00000362954 107 ntBASIC2.58□□□□□ -2
HERVK_113P62684 RNU6-23P-201ENST00000363283 107 ntBASIC2.58□□□□□ -2
HERVK_113P62684 SNORA33-201ENST00000363664 130 ntBASIC2.58□□□□□ -2
HERVK_113P62684 SNORD45.3-201ENST00000363836 72 ntBASIC2.58□□□□□ -2
HERVK_113P62684 RNA5SP99-201ENST00000364020 114 ntBASIC2.58□□□□□ -2
HERVK_113P62684 Y_RNA.267-201ENST00000364679 109 ntBASIC2.58□□□□□ -2
HERVK_113P62684 RNU6-1080P-201ENST00000383982 107 ntBASIC2.58□□□□□ -2
HERVK_113P62684 Y_RNA.497-201ENST00000384447 98 ntBASIC2.58□□□□□ -2
HERVK_113P62684 MIR520G-201ENST00000385064 90 ntBASIC2.58□□□□□ -2
HERVK_113P62684 SNORD37.2-201ENST00000391075 66 ntBASIC2.58□□□□□ -2
HERVK_113P62684 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.58□□□□□ -2
HERVK_113P62684 SNORA79-201ENST00000408376 140 ntBASIC2.58□□□□□ -2
HERVK_113P62684 RN7SKP101-201ENST00000411376 320 ntBASIC2.58□□□□□ -2
HERVK_113P62684 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.58□□□□□ -2
HERVK_113P62684 AL603825.1-201ENST00000438481 80 ntBASIC2.58□□□□□ -2
HERVK_113P62684 AC023449.1-201ENST00000454464 154 ntBASIC2.58□□□□□ -2
HERVK_113P62684 RNU1-131P-201ENST00000458943 161 ntBASIC2.58□□□□□ -2
HERVK_113P62684 SNORA31.11-201ENST00000516528 139 ntBASIC2.58□□□□□ -2
HERVK_113P62684 RNU6-1291P-201ENST00000516591 104 ntBASIC2.58□□□□□ -2
HERVK_113P62684 RNU7-121P-201ENST00000516604 62 ntBASIC2.58□□□□□ -2
HERVK_113P62684 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.58□□□□□ -2
HERVK_113P62684 MIR2681-201ENST00000581814 105 ntBASIC2.58□□□□□ -2
HERVK_113P62684 DNAJC19P2-201ENST00000593340 302 ntBASIC2.58□□□□□ -2
HERVK_113P62684 MIR6766-201ENST00000622641 72 ntBASIC2.58□□□□□ -2
HERVK_113P62684 AC091895.1-201ENST00000624494 256 ntBASIC2.58□□□□□ -2
HERVK_113P62684 MIR219B-201ENST00000637023 88 ntBASIC2.58□□□□□ -2
HERVK_113P62684 AC092881.1-201ENST00000638218 2733 ntBASIC2.57□□□□□ -2
HERVK_113P62684 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
HERVK_113P62684 SNORA8-201ENST00000384574 139 ntBASIC2.57□□□□□ -2
HERVK_113P62684 RNU6-131P-201ENST00000391144 107 ntBASIC2.57□□□□□ -2
HERVK_113P62684 RNU11-5P-201ENST00000391216 129 ntBASIC2.57□□□□□ -2
HERVK_113P62684 AL023284.1-201ENST00000403956 276 ntBASIC2.57□□□□□ -2
HERVK_113P62684 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.57□□□□□ -2
HERVK_113P62684 RNA5SP272-201ENST00000516095 111 ntBASIC2.57□□□□□ -2
HERVK_113P62684 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
HERVK_113P62684 JPX_2.1-201ENST00000614161 69 ntBASIC2.57□□□□□ -2
HERVK_113P62684 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
HERVK_113P62684 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HERVK_113P62684 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
HERVK_113P62684 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
HERVK_113P62684 AC100821.1-201ENST00000523153 2479 ntBASIC2.56□□□□□ -2
HERVK_113P62684 RNU6-862P-201ENST00000362804 105 ntBASIC2.56□□□□□ -2
HERVK_113P62684 RNU6-1209P-201ENST00000363655 107 ntBASIC2.56□□□□□ -2
HERVK_113P62684 RNA5SP493-201ENST00000364115 91 ntBASIC2.56□□□□□ -2
HERVK_113P62684 SNORD50.2-201ENST00000365465 70 ntBASIC2.56□□□□□ -2
HERVK_113P62684 SNORA11.4-201ENST00000408823 129 ntBASIC2.56□□□□□ -2
HERVK_113P62684 SNRPGP8-201ENST00000454064 226 ntBASIC2.56□□□□□ -2
HERVK_113P62684 SNORA25.12-201ENST00000516202 82 ntBASIC2.56□□□□□ -2
HERVK_113P62684 RNU6-426P-201ENST00000516464 97 ntBASIC2.56□□□□□ -2
HERVK_113P62684 RNU7-128P-201ENST00000517247 62 ntBASIC2.56□□□□□ -2
HERVK_113P62684 CYCSP26-201ENST00000534107 320 ntBASIC2.56□□□□□ -2
HERVK_113P62684 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
HERVK_113P62684 MIR548X2-201ENST00000579776 100 ntBASIC2.56□□□□□ -2
HERVK_113P62684 AL353149.1-201ENST00000610667 244 ntBASIC2.56□□□□□ -2
HERVK_113P62684 AC012640.5-201ENST00000623897 319 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms