Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNA5SP109-201ENST00000391010 116 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 SNORD37.2-201ENST00000391075 66 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 HMGN2P39-201ENST00000398005 273 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RNA5SP184-201ENST00000411071 108 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 MLLT10P1-201ENST00000418346 262 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RPS12P2-201ENST00000439728 269 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RPS27P1-201ENST00000450552 247 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 OR9P1P-201ENST00000496431 281 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RNA5SP356-201ENST00000515972 94 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RNA5SP272-201ENST00000516095 111 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RNU6-426P-201ENST00000516464 97 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 RNU2-56P-201ENST00000516826 190 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 AC084364.2-201ENST00000546924 395 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 AL033523.1-201ENST00000605153 153 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 SNORD14A-201ENST00000606526 91 ntBASIC2.23□□□□□ -2.05
CLRN1P58418 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CLRN1P58418 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLRN1P58418 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLRN1P58418 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CLRN1P58418 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CLRN1P58418 AC062016.1-201ENST00000355719 319 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 Y_RNA.91-201ENST00000363042 107 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 Y_RNA.393-201ENST00000383936 102 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 Y_RNA.568-201ENST00000384742 113 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 MIR27B-201ENST00000385129 97 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 RNU2-70P-201ENST00000410718 179 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 AC245047.3-201ENST00000429428 127 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 SUMO1P4-201ENST00000429430 302 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.22□□□□□ -2.05
CLRN1P58418 AC004486.1-201ENST00000546846 233 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 MIR4513-201ENST00000581077 86 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 MIR3670-2-201ENST00000582974 65 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 MIR3670-1-201ENST00000584160 65 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 MIR3670-3-201ENST00000584855 65 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 AC069114.2-201ENST00000604699 304 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 MIR3670-4-201ENST00000612260 65 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 AC010297.1-201ENST00000623948 149 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 CTSLP2-204ENST00000629029 392 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 FO624990.1-201ENST00000636373 85 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 MIR6844-201ENST00000637122 62 ntBASIC2.22□□□□□ -2.05
CLRN1P58418 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLRN1P58418 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLRN1P58418 RNU6-1019P-201ENST00000364424 107 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 Y_RNA.634-201ENST00000364811 113 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 RNU6-1138P-201ENST00000365359 106 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 Y_RNA.486-201ENST00000384398 107 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 Y_RNA.500-201ENST00000384466 111 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CLRN1P58418 MIR513C-201ENST00000401352 84 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.21□□□□□ -2.06
CLRN1P58418 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.21□□□□□ -2.06
CLRN1P58418 AC245047.4-201ENST00000433189 144 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.21□□□□□ -2.06
CLRN1P58418 SNORA59A-201ENST00000459326 152 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 SNORA25.12-201ENST00000516202 82 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 RNA5SP153-201ENST00000516498 76 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 AL160236.1-201ENST00000556317 195 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.21□□□□□ -2.06
CLRN1P58418 AC112693.2-201ENST00000556538 232 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 AC120024.3-201ENST00000603167 156 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.21□□□□□ -2.06
CLRN1P58418 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CLRN1P58418 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLRN1P58418 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
CLRN1P58418 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CLRN1P58418 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.2□□□□□ -2.06
CLRN1P58418 RNA5SP456-201ENST00000364002 114 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 RNU1-138P-201ENST00000384093 164 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 RNA5SP465-201ENST00000391195 109 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 RNU6-588P-201ENST00000410281 105 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 RNA5SP270-201ENST00000411361 118 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 CYCSP49-201ENST00000420810 319 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.2□□□□□ -2.06
CLRN1P58418 MRPS17P9-201ENST00000511924 393 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 MIR3646-201ENST00000578301 84 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 MIR4662B-201ENST00000579498 81 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 U4.3-201ENST00000621047 82 ntBASIC2.2□□□□□ -2.06
CLRN1P58418 SNORD68-201ENST00000363214 84 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 RNU6-978P-201ENST00000364371 103 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 MIR522-201ENST00000385071 87 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 SNORD72-201ENST00000390994 80 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 AL606753.1-201ENST00000427435 87 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 RNA5SP320-201ENST00000516263 124 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 RNU1-104P-201ENST00000517280 175 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
CLRN1P58418 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLRN1P58418 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLRN1P58418 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLRN1P58418 SNORA3A-201ENST00000364113 130 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 RNU6-1082P-201ENST00000364574 107 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 RNU6-597P-201ENST00000365620 102 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 RNU6-1336P-201ENST00000383886 109 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 SNORA20-201ENST00000384662 132 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 SNORA26-201ENST00000391286 122 ntBASIC2.18□□□□□ -2.06
CLRN1P58418 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.18□□□□□ -2.06
CLRN1P58418 RPL30P13-201ENST00000418873 348 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms