Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 HSPE1P9-201ENST00000440046 311 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 JTBP1-201ENST00000441314 247 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 SNORA40.15-201ENST00000516884 107 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 RNU7-110P-201ENST00000516891 62 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 AC011373.1-201ENST00000607270 237 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 AP001282.2-201ENST00000616149 309 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 MIR8062-201ENST00000621515 85 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 MIR6767-201ENST00000637302 66 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 U6.108-201ENST00000637764 58 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 MIR302D-201ENST00000362275 68 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 RNU6-414P-201ENST00000363705 104 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 Y_RNA.230-201ENST00000364348 109 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 RNU4-38P-201ENST00000364472 129 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 Y_RNA.329-201ENST00000365209 107 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 Y_RNA.331-201ENST00000365267 102 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 Y_RNA.361-201ENST00000365515 120 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 Y_RNA.418-201ENST00000384029 102 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 RNU6-417P-201ENST00000384712 107 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 RNU5A-5P-201ENST00000411054 116 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 HMGN2P34-201ENST00000437647 269 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 AL135790.2-201ENST00000437701 267 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.32□□□□□ -2.2
RIPK4P57078 MRPS10P1-201ENST00000448483 130 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 snoU13.9-201ENST00000458927 103 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 RNU6-155P-201ENST00000516347 100 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 Y_RNA.713-201ENST00000517013 96 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.32□□□□□ -2.2
RIPK4P57078 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.32□□□□□ -2.2
RIPK4P57078 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 DEFB117-201ENST00000602356 141 ntBASIC1.32□□□□□ -2.2
RIPK4P57078 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
RIPK4P57078 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.31□□□□□ -2.2
RIPK4P57078 snoU2-30.2-201ENST00000362805 70 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 Y_RNA.152-201ENST00000363578 100 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 Y_RNA.176-201ENST00000363815 109 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 Y_RNA.193-201ENST00000363979 102 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 SNORA72.2-201ENST00000365028 127 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 RNU6-1240P-201ENST00000365155 104 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 Y_RNA.355-201ENST00000365462 98 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 RNU6-1310P-201ENST00000384153 107 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 MIR515-2-201ENST00000384883 83 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 MIR515-1-201ENST00000384884 83 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 Y_RNA.581-201ENST00000391017 97 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 AL031003.1-201ENST00000404229 172 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 RNU6-1203P-201ENST00000410703 110 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 RPS29P28-201ENST00000446439 141 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 MTND1P19-201ENST00000511780 315 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 RNU7-128P-201ENST00000517247 62 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.31□□□□□ -2.2
RIPK4P57078 AC023157.2-201ENST00000540596 141 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.31□□□□□ -2.2
RIPK4P57078 AC127459.3-201ENST00000624328 466 ntBASIC1.31□□□□□ -2.2
RIPK4P57078 AC068700.1-201ENST00000565862 3754 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 Y_RNA.383-201ENST00000383855 97 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 RNU6-505P-201ENST00000384427 107 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 MRPL35P3-201ENST00000421557 364 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 AC074290.1-201ENST00000448883 135 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.3□□□□□ -2.2
RIPK4P57078 SEPT14P8-201ENST00000508026 178 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 RNU6-1146P-201ENST00000516282 102 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 Y_RNA.680-201ENST00000516441 93 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 RNU6-63P-201ENST00000516690 95 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 DEFB108E-201ENST00000524692 240 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 RPL21P9-201ENST00000556149 474 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.3□□□□□ -2.2
RIPK4P57078 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 SNORD113-5-201ENST00000607261 78 ntBASIC1.3□□□□□ -2.2
RIPK4P57078 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RIPK4P57078 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RIPK4P57078 SNORA27.1-201ENST00000362604 124 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 Y_RNA.237-201ENST00000364439 102 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 Y_RNA.466-201ENST00000384294 113 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 MIR518E-201ENST00000385252 88 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 RNU2-61P-201ENST00000411069 191 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 AC005042.3-201ENST00000453230 174 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 AC010598.1-201ENST00000510378 103 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 RNU6-1338P-201ENST00000516328 91 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 SCARNA24.2-201ENST00000516968 130 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.29□□□□□ -2.2
RIPK4P57078 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
RIPK4P57078 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
RIPK4P57078 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU4-80P-201ENST00000363200 141 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 Y_RNA.144-201ENST00000363521 113 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 Y_RNA.149-201ENST00000363558 117 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-271P-201ENST00000363858 105 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-324P-201ENST00000363957 106 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-801P-201ENST00000364087 105 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 Y_RNA.224-201ENST00000364308 111 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU1-93P-201ENST00000364704 169 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-117P-201ENST00000365415 107 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 Y_RNA.461-201ENST00000384263 103 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-463P-201ENST00000384340 107 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 SNORD116-13-201ENST00000384408 92 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 RNU6-21P-201ENST00000384710 107 ntBASIC1.28□□□□□ -2.2
RIPK4P57078 MIR194-1-201ENST00000384892 85 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms