Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AL355297.2-201ENST00000604792 129 ntBASIC2.08□□□□□ -2.08
TTC3P53804 Y_RNA.802-201ENST00000614892 130 ntBASIC2.08□□□□□ -2.08
TTC3P53804 MIR548AY-201ENST00000617669 107 ntBASIC2.08□□□□□ -2.08
TTC3P53804 MIR1248-201ENST00000629190 106 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.08□□□□□ -2.08
TTC3P53804 Y_RNA.4-201ENST00000362333 112 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RNU6-376P-201ENST00000384731 106 ntBASIC2.08□□□□□ -2.08
TTC3P53804 EBAG9P1-201ENST00000418955 543 ntBASIC2.08□□□□□ -2.08
TTC3P53804 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
TTC3P53804 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.08□□□□□ -2.08
TTC3P53804 RNU6-197P-201ENST00000516680 100 ntBASIC2.08□□□□□ -2.08
TTC3P53804 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.08□□□□□ -2.08
TTC3P53804 MIR548AI-201ENST00000579940 88 ntBASIC2.08□□□□□ -2.08
TTC3P53804 MTND1P7-201ENST00000632801 297 ntBASIC2.08□□□□□ -2.08
TTC3P53804 FO624990.1-201ENST00000636373 85 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RNU6-1205P-201ENST00000363625 106 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNU6-117P-201ENST00000365415 107 ntBASIC2.07□□□□□ -2.08
TTC3P53804 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.07□□□□□ -2.08
TTC3P53804 MIR15B-201ENST00000385045 98 ntBASIC2.07□□□□□ -2.08
TTC3P53804 MIR526A2-201ENST00000390198 65 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNU6-131P-201ENST00000391144 107 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNA5SP467-201ENST00000391274 118 ntBASIC2.07□□□□□ -2.08
TTC3P53804 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.07□□□□□ -2.08
TTC3P53804 RNU6-1234P-201ENST00000516877 103 ntBASIC2.07□□□□□ -2.08
TTC3P53804 snoU2-30.2-201ENST00000362805 70 ntBASIC2.07□□□□□ -2.08
TTC3P53804 SNORD45.3-201ENST00000363836 72 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNU6-457P-201ENST00000363999 107 ntBASIC2.07□□□□□ -2.08
TTC3P53804 SNORD114-6-201ENST00000364393 72 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNU6-1082P-201ENST00000364574 107 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNU6-449P-201ENST00000383914 107 ntBASIC2.07□□□□□ -2.08
TTC3P53804 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNA5SP247-201ENST00000411181 105 ntBASIC2.07□□□□□ -2.08
TTC3P53804 AL353689.1-201ENST00000438895 199 ntBASIC2.07□□□□□ -2.08
TTC3P53804 AC080013.2-201ENST00000460866 323 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNU6-62P-201ENST00000516526 102 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNU7-121P-201ENST00000516604 62 ntBASIC2.07□□□□□ -2.08
TTC3P53804 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
TTC3P53804 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.07□□□□□ -2.08
TTC3P53804 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.07□□□□□ -2.08
TTC3P53804 AC127455.1-201ENST00000565496 145 ntBASIC2.07□□□□□ -2.08
TTC3P53804 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.07□□□□□ -2.08
TTC3P53804 MIR6844-201ENST00000637122 62 ntBASIC2.07□□□□□ -2.08
TTC3P53804 ZNF702P-202ENST00000434269 1966 ntBASIC2.06□□□□□ -2.08
TTC3P53804 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
TTC3P53804 RNU6-271P-201ENST00000363858 105 ntBASIC2.06□□□□□ -2.08
TTC3P53804 RNU6-597P-201ENST00000365620 102 ntBASIC2.06□□□□□ -2.08
TTC3P53804 Y_RNA.488-201ENST00000384403 102 ntBASIC2.06□□□□□ -2.08
TTC3P53804 RNU6-768P-201ENST00000384683 107 ntBASIC2.06□□□□□ -2.08
TTC3P53804 Y_RNA.572-201ENST00000384757 98 ntBASIC2.06□□□□□ -2.08
TTC3P53804 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
TTC3P53804 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.06□□□□□ -2.08
TTC3P53804 AC023141.11-201ENST00000508864 202 ntBASIC2.06□□□□□ -2.08
TTC3P53804 AC025647.1-201ENST00000517879 253 ntBASIC2.06□□□□□ -2.08
TTC3P53804 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
TTC3P53804 Y_RNA.24-201ENST00000362508 103 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNU6-275P-201ENST00000364910 107 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNU6-1274P-201ENST00000384557 107 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNU6-160P-201ENST00000384591 107 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNU4-62P-201ENST00000410125 130 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
TTC3P53804 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.05□□□□□ -2.08
TTC3P53804 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.05□□□□□ -2.08
TTC3P53804 Y_RNA.218-201ENST00000364218 104 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNU6-81P-201ENST00000365608 104 ntBASIC2.05□□□□□ -2.08
TTC3P53804 Y_RNA.568-201ENST00000384742 113 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNA5SP511-201ENST00000410487 115 ntBASIC2.05□□□□□ -2.08
TTC3P53804 AC010154.1-201ENST00000425857 269 ntBASIC2.05□□□□□ -2.08
TTC3P53804 SNRPGP8-201ENST00000454064 226 ntBASIC2.05□□□□□ -2.08
TTC3P53804 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
TTC3P53804 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
TTC3P53804 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TTC3P53804 RNU6-199P-201ENST00000362954 107 ntBASIC2.04□□□□□ -2.08
TTC3P53804 RNU6-417P-201ENST00000384712 107 ntBASIC2.04□□□□□ -2.08
TTC3P53804 RNU2-32P-201ENST00000411193 191 ntBASIC2.04□□□□□ -2.08
TTC3P53804 RPS4XP11-201ENST00000446897 772 ntBASIC2.04□□□□□ -2.08
TTC3P53804 AC091021.1-201ENST00000468051 388 ntBASIC2.04□□□□□ -2.08
TTC3P53804 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.04□□□□□ -2.08
TTC3P53804 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.04□□□□□ -2.08
TTC3P53804 SNORA25.12-201ENST00000516202 82 ntBASIC2.04□□□□□ -2.08
TTC3P53804 RNU2-34P-201ENST00000516534 121 ntBASIC2.04□□□□□ -2.08
TTC3P53804 RPPH1-2P-201ENST00000516688 293 ntBASIC2.04□□□□□ -2.08
TTC3P53804 RNU7-149P-201ENST00000516739 59 ntBASIC2.04□□□□□ -2.08
TTC3P53804 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.04□□□□□ -2.08
TTC3P53804 AC027419.1-201ENST00000522976 328 ntBASIC2.04□□□□□ -2.08
TTC3P53804 AC068647.2-201ENST00000637380 353 ntBASIC2.04□□□□□ -2.08
TTC3P53804 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TTC3P53804 RNU6-643P-201ENST00000384018 107 ntBASIC2.03□□□□□ -2.08
TTC3P53804 RNU6-1323P-201ENST00000384025 107 ntBASIC2.03□□□□□ -2.08
TTC3P53804 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.03□□□□□ -2.08
TTC3P53804 MTCO1P44-201ENST00000441935 243 ntBASIC2.03□□□□□ -2.08
TTC3P53804 HMGN2P18-201ENST00000450680 270 ntBASIC2.03□□□□□ -2.08
TTC3P53804 ATP5J2P3-201ENST00000451550 258 ntBASIC2.03□□□□□ -2.08
TTC3P53804 RPS26P55-201ENST00000471178 356 ntBASIC2.03□□□□□ -2.08
TTC3P53804 RNA5SP272-201ENST00000516095 111 ntBASIC2.03□□□□□ -2.08
TTC3P53804 RNU6-561P-201ENST00000516222 102 ntBASIC2.03□□□□□ -2.08
TTC3P53804 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
TTC3P53804 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
TTC3P53804 snoU2_19.4-201ENST00000364329 80 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms