Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RNU6-1310P-201ENST00000384153 107 ntBASIC0.49□□□□□ -2.33
ACLYP53396 Y_RNA.450-201ENST00000384198 113 ntBASIC0.49□□□□□ -2.33
ACLYP53396 Y_RNA.594-201ENST00000410373 140 ntBASIC0.49□□□□□ -2.33
ACLYP53396 AL353997.1-201ENST00000432936 108 ntBASIC0.49□□□□□ -2.33
ACLYP53396 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.49□□□□□ -2.33
ACLYP53396 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
ACLYP53396 RPS29P25-201ENST00000481709 171 ntBASIC0.49□□□□□ -2.33
ACLYP53396 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.49□□□□□ -2.33
ACLYP53396 Y_RNA.682-201ENST00000516457 100 ntBASIC0.49□□□□□ -2.33
ACLYP53396 RNU6-1337P-201ENST00000516525 95 ntBASIC0.49□□□□□ -2.33
ACLYP53396 RNU7-43P-201ENST00000516554 64 ntBASIC0.49□□□□□ -2.33
ACLYP53396 MIR4764-201ENST00000580680 88 ntBASIC0.49□□□□□ -2.33
ACLYP53396 RNU6-94P-201ENST00000607728 107 ntBASIC0.49□□□□□ -2.33
ACLYP53396 AC015540.1-201ENST00000615828 501 ntBASIC0.49□□□□□ -2.33
ACLYP53396 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.49□□□□□ -2.33
ACLYP53396 SNORD115-30-201ENST00000364117 82 ntBASIC0.48□□□□□ -2.33
ACLYP53396 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
ACLYP53396 RNU6-1050P-201ENST00000410388 107 ntBASIC0.48□□□□□ -2.33
ACLYP53396 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.48□□□□□ -2.33
ACLYP53396 SNORA18.7-201ENST00000516910 131 ntBASIC0.48□□□□□ -2.33
ACLYP53396 AL136317.1-201ENST00000612653 226 ntBASIC0.48□□□□□ -2.33
ACLYP53396 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ACLYP53396 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
ACLYP53396 RNU6-994P-201ENST00000410507 111 ntBASIC0.47□□□□□ -2.33
ACLYP53396 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
ACLYP53396 RNU2-12P-201ENST00000517216 168 ntBASIC0.47□□□□□ -2.33
ACLYP53396 AC036111.3-201ENST00000526389 112 ntBASIC0.47□□□□□ -2.33
ACLYP53396 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.47□□□□□ -2.33
ACLYP53396 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
ACLYP53396 RNU6-1301P-201ENST00000362724 104 ntBASIC0.46□□□□□ -2.34
ACLYP53396 RNU6-593P-201ENST00000364716 112 ntBASIC0.46□□□□□ -2.34
ACLYP53396 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
ACLYP53396 RNU6-1067P-201ENST00000384752 107 ntBASIC0.46□□□□□ -2.34
ACLYP53396 Y_RNA.573-201ENST00000384763 105 ntBASIC0.46□□□□□ -2.34
ACLYP53396 SNORD111-201ENST00000408139 94 ntBASIC0.46□□□□□ -2.34
ACLYP53396 SNORD12B-201ENST00000410433 91 ntBASIC0.46□□□□□ -2.34
ACLYP53396 AC092423.1-201ENST00000430165 186 ntBASIC0.46□□□□□ -2.34
ACLYP53396 RNU6-329P-201ENST00000459618 107 ntBASIC0.46□□□□□ -2.34
ACLYP53396 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.46□□□□□ -2.34
ACLYP53396 RNU11-2P-201ENST00000516898 142 ntBASIC0.46□□□□□ -2.34
ACLYP53396 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.46□□□□□ -2.34
ACLYP53396 MIR4514-201ENST00000581410 57 ntBASIC0.46□□□□□ -2.34
ACLYP53396 AC004467.1-201ENST00000615678 330 ntBASIC0.46□□□□□ -2.34
ACLYP53396 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
ACLYP53396 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
ACLYP53396 Y_RNA.253-201ENST00000364562 112 ntBASIC0.45□□□□□ -2.34
ACLYP53396 MIR522-201ENST00000385071 87 ntBASIC0.45□□□□□ -2.34
ACLYP53396 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
ACLYP53396 MIR548K-201ENST00000408406 116 ntBASIC0.45□□□□□ -2.34
ACLYP53396 AC244098.3-201ENST00000424803 96 ntBASIC0.45□□□□□ -2.34
ACLYP53396 MTND2P22-201ENST00000444325 1033 ntBASIC0.45□□□□□ -2.34
ACLYP53396 SNORA25.10-201ENST00000515926 124 ntBASIC0.45□□□□□ -2.34
ACLYP53396 AC022616.4-201ENST00000522985 181 ntBASIC0.45□□□□□ -2.34
ACLYP53396 Y_RNA.433-201ENST00000384089 102 ntBASIC0.44□□□□□ -2.34
ACLYP53396 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
ACLYP53396 RPS3AP52-201ENST00000435639 297 ntBASIC0.44□□□□□ -2.34
ACLYP53396 HMGN2P32-201ENST00000444648 269 ntBASIC0.44□□□□□ -2.34
ACLYP53396 Z83846.1-201ENST00000446798 265 ntBASIC0.44□□□□□ -2.34
ACLYP53396 SNORD123-201ENST00000459473 70 ntBASIC0.44□□□□□ -2.34
ACLYP53396 RNU6-408P-201ENST00000515910 100 ntBASIC0.44□□□□□ -2.34
ACLYP53396 RNU4-57P-201ENST00000515980 135 ntBASIC0.44□□□□□ -2.34
ACLYP53396 SNORD45.4-201ENST00000516629 73 ntBASIC0.44□□□□□ -2.34
ACLYP53396 Y_RNA.708-201ENST00000516950 96 ntBASIC0.44□□□□□ -2.34
ACLYP53396 AF235103.2-201ENST00000525753 346 ntBASIC0.44□□□□□ -2.34
ACLYP53396 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.44□□□□□ -2.34
ACLYP53396 AC055872.1-201ENST00000570978 278 ntBASIC0.44□□□□□ -2.34
ACLYP53396 AC011195.1-201ENST00000578177 177 ntBASIC0.44□□□□□ -2.34
ACLYP53396 AC018638.8-201ENST00000588755 281 ntBASIC0.44□□□□□ -2.34
ACLYP53396 RNA5SP62-201ENST00000363457 110 ntBASIC0.43□□□□□ -2.34
ACLYP53396 RNU6-961P-201ENST00000363893 105 ntBASIC0.43□□□□□ -2.34
ACLYP53396 snoU2-30.1-201ENST00000365012 70 ntBASIC0.43□□□□□ -2.34
ACLYP53396 MIR548F5-201ENST00000408421 86 ntBASIC0.43□□□□□ -2.34
ACLYP53396 AL390729.2-201ENST00000416137 156 ntBASIC0.43□□□□□ -2.34
ACLYP53396 MLLT10P1-201ENST00000418346 262 ntBASIC0.43□□□□□ -2.34
ACLYP53396 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.43□□□□□ -2.34
ACLYP53396 MTND1P4-201ENST00000435196 415 ntBASIC0.43□□□□□ -2.34
ACLYP53396 RPL7P42-201ENST00000481005 679 ntBASIC0.43□□□□□ -2.34
ACLYP53396 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
ACLYP53396 MIR2355-201ENST00000517199 87 ntBASIC0.43□□□□□ -2.34
ACLYP53396 Z83818.1-201ENST00000603584 150 ntBASIC0.43□□□□□ -2.34
ACLYP53396 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.43□□□□□ -2.34
ACLYP53396 RNU6-1084P-201ENST00000362498 107 ntBASIC0.42□□□□□ -2.34
ACLYP53396 SNORD113.3-201ENST00000364630 78 ntBASIC0.42□□□□□ -2.34
ACLYP53396 Y_RNA.404-201ENST00000383978 102 ntBASIC0.42□□□□□ -2.34
ACLYP53396 RNU6-1237P-201ENST00000384777 107 ntBASIC0.42□□□□□ -2.34
ACLYP53396 AL031003.1-201ENST00000404229 172 ntBASIC0.42□□□□□ -2.34
ACLYP53396 MIR1827-201ENST00000408549 66 ntBASIC0.42□□□□□ -2.34
ACLYP53396 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.42□□□□□ -2.34
ACLYP53396 MIR1302-7-201ENST00000408841 72 ntBASIC0.42□□□□□ -2.34
ACLYP53396 RNU6-1304P-201ENST00000411374 106 ntBASIC0.42□□□□□ -2.34
ACLYP53396 MRPS18CP6-201ENST00000423587 223 ntBASIC0.42□□□□□ -2.34
ACLYP53396 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.42□□□□□ -2.34
ACLYP53396 AL392103.1-201ENST00000447000 198 ntBASIC0.42□□□□□ -2.34
ACLYP53396 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.42□□□□□ -2.34
ACLYP53396 AC093027.1-201ENST00000546698 429 ntBASIC0.42□□□□□ -2.34
ACLYP53396 EIF1P4-201ENST00000572664 335 ntBASIC0.42□□□□□ -2.34
ACLYP53396 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.42□□□□□ -2.34
ACLYP53396 AC006380.1-201ENST00000603598 186 ntBASIC0.42□□□□□ -2.34
ACLYP53396 MIR1244-1-201ENST00000612829 85 ntBASIC0.42□□□□□ -2.34
ACLYP53396 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms