Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNA5SP257-201ENST00000363023 116 ntBASIC1.54□□□□□ -2.16
LBX1P52954 SNORA63C-201ENST00000364578 129 ntBASIC1.54□□□□□ -2.16
LBX1P52954 SNORD48-201ENST00000364953 64 ntBASIC1.54□□□□□ -2.16
LBX1P52954 RNU6-505P-201ENST00000384427 107 ntBASIC1.54□□□□□ -2.16
LBX1P52954 RNU6-102P-201ENST00000384485 104 ntBASIC1.54□□□□□ -2.16
LBX1P52954 AL078595.1-201ENST00000404458 226 ntBASIC1.54□□□□□ -2.16
LBX1P52954 MIR548F4-201ENST00000408515 105 ntBASIC1.54□□□□□ -2.16
LBX1P52954 ELOCP20-201ENST00000422460 345 ntBASIC1.54□□□□□ -2.16
LBX1P52954 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.54□□□□□ -2.16
LBX1P52954 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.54□□□□□ -2.16
LBX1P52954 MIR3660-201ENST00000584845 100 ntBASIC1.54□□□□□ -2.16
LBX1P52954 MIR6086-201ENST00000638065 55 ntBASIC1.54□□□□□ -2.16
LBX1P52954 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
LBX1P52954 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LBX1P52954 AC018630.2-201ENST00000534866 2403 ntBASIC1.54□□□□□ -2.16
LBX1P52954 Y_RNA.214-201ENST00000364201 112 ntBASIC1.53□□□□□ -2.16
LBX1P52954 SNORA4.2-201ENST00000365313 147 ntBASIC1.53□□□□□ -2.16
LBX1P52954 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.389-201ENST00000383924 113 ntBASIC1.53□□□□□ -2.16
LBX1P52954 RNU6-639P-201ENST00000384074 107 ntBASIC1.53□□□□□ -2.16
LBX1P52954 MIR194-1-201ENST00000384892 85 ntBASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.581-201ENST00000391017 97 ntBASIC1.53□□□□□ -2.16
LBX1P52954 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
LBX1P52954 HSPE1P9-201ENST00000440046 311 ntBASIC1.53□□□□□ -2.16
LBX1P52954 HSPE1P25-201ENST00000455484 251 ntBASIC1.53□□□□□ -2.16
LBX1P52954 RPS27P22-201ENST00000478056 241 ntBASIC1.53□□□□□ -2.16
LBX1P52954 RNU6-496P-201ENST00000516145 99 ntBASIC1.53□□□□□ -2.16
LBX1P52954 RNU6-155P-201ENST00000516347 100 ntBASIC1.53□□□□□ -2.16
LBX1P52954 RNU6-764P-201ENST00000516396 105 ntBASIC1.53□□□□□ -2.16
LBX1P52954 AC131281.1-201ENST00000522984 164 ntBASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.812-201ENST00000610788 101 ntBASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.784-201ENST00000613803 101 ntBASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.787-201ENST00000616522 101 ntBASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.780-201ENST00000617336 101 ntBASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.801-201ENST00000619005 101 ntBASIC1.53□□□□□ -2.16
LBX1P52954 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.53□□□□□ -2.16
LBX1P52954 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
LBX1P52954 Y_RNA.143-201ENST00000363520 106 ntBASIC1.52□□□□□ -2.17
LBX1P52954 Y_RNA.286-201ENST00000364813 102 ntBASIC1.52□□□□□ -2.17
LBX1P52954 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.52□□□□□ -2.17
LBX1P52954 RNU6-1160P-201ENST00000384546 104 ntBASIC1.52□□□□□ -2.17
LBX1P52954 Y_RNA.518-201ENST00000384552 113 ntBASIC1.52□□□□□ -2.17
LBX1P52954 RNU6-1011P-201ENST00000384668 107 ntBASIC1.52□□□□□ -2.17
LBX1P52954 RNA5SP109-201ENST00000391010 116 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AC113618.1-201ENST00000416747 285 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.52□□□□□ -2.17
LBX1P52954 FTH1P12-201ENST00000432137 551 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.52□□□□□ -2.17
LBX1P52954 RNA5SP121-201ENST00000516537 101 ntBASIC1.52□□□□□ -2.17
LBX1P52954 RNU1-142P-201ENST00000516682 145 ntBASIC1.52□□□□□ -2.17
LBX1P52954 RNA5SP481-201ENST00000516814 122 ntBASIC1.52□□□□□ -2.17
LBX1P52954 RNU7-172P-201ENST00000517125 64 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AL442663.2-201ENST00000554385 511 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AC073413.2-201ENST00000604332 360 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AL020996.3-201ENST00000606617 222 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AL109933.3-201ENST00000619095 188 ntBASIC1.52□□□□□ -2.17
LBX1P52954 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
LBX1P52954 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
LBX1P52954 Y_RNA.26-201ENST00000362539 101 ntBASIC1.51□□□□□ -2.17
LBX1P52954 Y_RNA.136-201ENST00000363444 102 ntBASIC1.51□□□□□ -2.17
LBX1P52954 Y_RNA.172-201ENST00000363765 102 ntBASIC1.51□□□□□ -2.17
LBX1P52954 RNU6-738P-201ENST00000384531 106 ntBASIC1.51□□□□□ -2.17
LBX1P52954 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
LBX1P52954 RN7SKP200-201ENST00000410564 320 ntBASIC1.51□□□□□ -2.17
LBX1P52954 LINC01399-202ENST00000458450 244 ntBASIC1.51□□□□□ -2.17
LBX1P52954 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
LBX1P52954 SNORA70.12-201ENST00000516084 153 ntBASIC1.51□□□□□ -2.17
LBX1P52954 RNU6-397P-201ENST00000516226 104 ntBASIC1.51□□□□□ -2.17
LBX1P52954 RNU6-1337P-201ENST00000516525 95 ntBASIC1.51□□□□□ -2.17
LBX1P52954 RNA5SP330-201ENST00000517096 96 ntBASIC1.51□□□□□ -2.17
LBX1P52954 AC027419.1-201ENST00000522976 328 ntBASIC1.51□□□□□ -2.17
LBX1P52954 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
LBX1P52954 AC006380.1-201ENST00000603598 186 ntBASIC1.51□□□□□ -2.17
LBX1P52954 AC004832.4-201ENST00000608952 331 ntBASIC1.51□□□□□ -2.17
LBX1P52954 MIR376A1-201ENST00000616574 68 ntBASIC1.51□□□□□ -2.17
LBX1P52954 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
LBX1P52954 snoU2_19.2-201ENST00000363024 80 ntBASIC1.5□□□□□ -2.17
LBX1P52954 Y_RNA.331-201ENST00000365267 102 ntBASIC1.5□□□□□ -2.17
LBX1P52954 RNU6-407P-201ENST00000365280 104 ntBASIC1.5□□□□□ -2.17
LBX1P52954 Y_RNA.418-201ENST00000384029 102 ntBASIC1.5□□□□□ -2.17
LBX1P52954 Y_RNA.422-201ENST00000384054 114 ntBASIC1.5□□□□□ -2.17
LBX1P52954 SNORD116-13-201ENST00000384408 92 ntBASIC1.5□□□□□ -2.17
LBX1P52954 RNU4-30P-201ENST00000410245 143 ntBASIC1.5□□□□□ -2.17
LBX1P52954 RNU6-1186P-201ENST00000410429 97 ntBASIC1.5□□□□□ -2.17
LBX1P52954 snoU13.27-201ENST00000459278 104 ntBASIC1.5□□□□□ -2.17
LBX1P52954 RNU7-94P-201ENST00000459576 63 ntBASIC1.5□□□□□ -2.17
LBX1P52954 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
LBX1P52954 RNU6-341P-201ENST00000516973 96 ntBASIC1.5□□□□□ -2.17
LBX1P52954 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.5□□□□□ -2.17
LBX1P52954 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.5□□□□□ -2.17
LBX1P52954 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
LBX1P52954 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.5□□□□□ -2.17
LBX1P52954 SNORD113-5-201ENST00000607261 78 ntBASIC1.5□□□□□ -2.17
LBX1P52954 AC011373.1-201ENST00000607270 237 ntBASIC1.5□□□□□ -2.17
LBX1P52954 MIR6079-201ENST00000635807 62 ntBASIC1.5□□□□□ -2.17
LBX1P52954 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LBX1P52954 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
LBX1P52954 Y_RNA.294-201ENST00000364916 102 ntBASIC1.49□□□□□ -2.17
LBX1P52954 Y_RNA.310-201ENST00000365063 113 ntBASIC1.49□□□□□ -2.17
LBX1P52954 RNU6-806P-201ENST00000365147 105 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms