Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC073349.3-201ENST00000617616 186 ntBASIC1.7□□□□□ -2.14
CLK1P49759 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.69□□□□□ -2.14
CLK1P49759 Y_RNA.304-201ENST00000365011 112 ntBASIC1.69□□□□□ -2.14
CLK1P49759 RNU6-117P-201ENST00000365415 107 ntBASIC1.69□□□□□ -2.14
CLK1P49759 SNORA72.4-201ENST00000384174 132 ntBASIC1.69□□□□□ -2.14
CLK1P49759 RNU6-1248P-201ENST00000391096 64 ntBASIC1.69□□□□□ -2.14
CLK1P49759 AC060773.1-201ENST00000421698 310 ntBASIC1.69□□□□□ -2.14
CLK1P49759 BTF3P11-201ENST00000426582 477 ntBASIC1.69□□□□□ -2.14
CLK1P49759 RPS26P55-201ENST00000471178 356 ntBASIC1.69□□□□□ -2.14
CLK1P49759 RN7SL429P-201ENST00000479090 223 ntBASIC1.69□□□□□ -2.14
CLK1P49759 RN7SL489P-201ENST00000486185 223 ntBASIC1.69□□□□□ -2.14
CLK1P49759 RN7SL327P-201ENST00000488659 223 ntBASIC1.69□□□□□ -2.14
CLK1P49759 Y_RNA.679-201ENST00000516416 91 ntBASIC1.69□□□□□ -2.14
CLK1P49759 SNORA81.3-201ENST00000517283 198 ntBASIC1.69□□□□□ -2.14
CLK1P49759 RN7SL853P-201ENST00000617250 223 ntBASIC1.69□□□□□ -2.14
CLK1P49759 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.69□□□□□ -2.14
CLK1P49759 RNU6-653P-201ENST00000363074 106 ntBASIC1.68□□□□□ -2.14
CLK1P49759 RNU6-1048P-201ENST00000364054 107 ntBASIC1.68□□□□□ -2.14
CLK1P49759 RNU6-1240P-201ENST00000365155 104 ntBASIC1.68□□□□□ -2.14
CLK1P49759 Y_RNA.456-201ENST00000384232 111 ntBASIC1.68□□□□□ -2.14
CLK1P49759 SNORD116-13-201ENST00000384408 92 ntBASIC1.68□□□□□ -2.14
CLK1P49759 RNU6-360P-201ENST00000390944 104 ntBASIC1.68□□□□□ -2.14
CLK1P49759 RNU6-855P-201ENST00000410395 104 ntBASIC1.68□□□□□ -2.14
CLK1P49759 RNU6-710P-201ENST00000410424 105 ntBASIC1.68□□□□□ -2.14
CLK1P49759 AC008134.1-201ENST00000420943 193 ntBASIC1.68□□□□□ -2.14
CLK1P49759 OOSP1P1-201ENST00000423265 274 ntBASIC1.68□□□□□ -2.14
CLK1P49759 AC024067.1-201ENST00000426199 223 ntBASIC1.68□□□□□ -2.14
CLK1P49759 MTND5P15-201ENST00000434246 349 ntBASIC1.68□□□□□ -2.14
CLK1P49759 JTBP1-201ENST00000441314 247 ntBASIC1.68□□□□□ -2.14
CLK1P49759 HSPE1P13-201ENST00000451143 297 ntBASIC1.68□□□□□ -2.14
CLK1P49759 RPS20P10-201ENST00000451209 253 ntBASIC1.68□□□□□ -2.14
CLK1P49759 UBL5P3-201ENST00000475112 231 ntBASIC1.68□□□□□ -2.14
CLK1P49759 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.68□□□□□ -2.14
CLK1P49759 SNORA70.12-201ENST00000516084 153 ntBASIC1.68□□□□□ -2.14
CLK1P49759 RNU6-1337P-201ENST00000516525 95 ntBASIC1.68□□□□□ -2.14
CLK1P49759 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.68□□□□□ -2.14
CLK1P49759 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.68□□□□□ -2.14
CLK1P49759 AL121890.5-201ENST00000620848 304 ntBASIC1.68□□□□□ -2.14
CLK1P49759 AC006435.5-201ENST00000624486 112 ntBASIC1.68□□□□□ -2.14
CLK1P49759 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CLK1P49759 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLK1P49759 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLK1P49759 Y_RNA.29-201ENST00000362570 113 ntBASIC1.67□□□□□ -2.14
CLK1P49759 RNU6-47P-201ENST00000383866 107 ntBASIC1.67□□□□□ -2.14
CLK1P49759 AC104332.1-201ENST00000440471 797 ntBASIC1.67□□□□□ -2.14
CLK1P49759 Y_RNA.644-201ENST00000459006 113 ntBASIC1.67□□□□□ -2.14
CLK1P49759 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.67□□□□□ -2.14
CLK1P49759 RNA5SP20-201ENST00000515976 84 ntBASIC1.67□□□□□ -2.14
CLK1P49759 RNY3P16-201ENST00000516338 101 ntBASIC1.67□□□□□ -2.14
CLK1P49759 Y_RNA.674-201ENST00000516362 113 ntBASIC1.67□□□□□ -2.14
CLK1P49759 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
CLK1P49759 RNA5SP481-201ENST00000516814 122 ntBASIC1.67□□□□□ -2.14
CLK1P49759 RNU6-902P-201ENST00000517212 91 ntBASIC1.67□□□□□ -2.14
CLK1P49759 AC027419.1-201ENST00000522976 328 ntBASIC1.67□□□□□ -2.14
CLK1P49759 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.67□□□□□ -2.14
CLK1P49759 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
CLK1P49759 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
CLK1P49759 AC004832.4-201ENST00000608952 331 ntBASIC1.67□□□□□ -2.14
CLK1P49759 AC004792.1-201ENST00000614523 137 ntBASIC1.67□□□□□ -2.14
CLK1P49759 FTX_2.1-201ENST00000618816 94 ntBASIC1.67□□□□□ -2.14
CLK1P49759 AL365265.1-201ENST00000621045 234 ntBASIC1.67□□□□□ -2.14
CLK1P49759 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLK1P49759 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CLK1P49759 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
CLK1P49759 ICE2P2-201ENST00000483823 2787 ntBASIC1.66□□□□□ -2.14
CLK1P49759 RNU6-271P-201ENST00000363858 105 ntBASIC1.66□□□□□ -2.14
CLK1P49759 Y_RNA.287-201ENST00000364853 94 ntBASIC1.66□□□□□ -2.14
CLK1P49759 RNU6-407P-201ENST00000365280 104 ntBASIC1.66□□□□□ -2.14
CLK1P49759 Y_RNA.341-201ENST00000365341 102 ntBASIC1.66□□□□□ -2.14
CLK1P49759 RNU6-918P-201ENST00000391219 106 ntBASIC1.66□□□□□ -2.14
CLK1P49759 PCNPP3-201ENST00000393579 471 ntBASIC1.66□□□□□ -2.14
CLK1P49759 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.66□□□□□ -2.14
CLK1P49759 HMGN2P34-201ENST00000437647 269 ntBASIC1.66□□□□□ -2.14
CLK1P49759 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.66□□□□□ -2.14
CLK1P49759 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.66□□□□□ -2.14
CLK1P49759 AC100767.1-201ENST00000528178 123 ntBASIC1.66□□□□□ -2.14
CLK1P49759 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLK1P49759 AC024405.2-202ENST00000532731 184 ntBASIC1.66□□□□□ -2.14
CLK1P49759 MIR4308-201ENST00000580634 81 ntBASIC1.66□□□□□ -2.14
CLK1P49759 SNRPGP19-201ENST00000603826 189 ntBASIC1.66□□□□□ -2.14
CLK1P49759 AC098479.1-201ENST00000609225 154 ntBASIC1.66□□□□□ -2.14
CLK1P49759 AC013791.1-201ENST00000616619 62 ntBASIC1.66□□□□□ -2.14
CLK1P49759 MIR8063-201ENST00000621930 81 ntBASIC1.66□□□□□ -2.14
CLK1P49759 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.66□□□□□ -2.14
CLK1P49759 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.66□□□□□ -2.14
CLK1P49759 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.66□□□□□ -2.14
CLK1P49759 AC134026.1-201ENST00000623249 2239 ntBASIC1.66□□□□□ -2.14
CLK1P49759 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLK1P49759 RNU1-22P-201ENST00000363334 158 ntBASIC1.65□□□□□ -2.15
CLK1P49759 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
CLK1P49759 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
CLK1P49759 AL117342.1-201ENST00000404861 406 ntBASIC1.65□□□□□ -2.15
CLK1P49759 PIGPP3-201ENST00000425307 415 ntBASIC1.65□□□□□ -2.15
CLK1P49759 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.65□□□□□ -2.15
CLK1P49759 AC069257.2-201ENST00000441819 155 ntBASIC1.65□□□□□ -2.15
CLK1P49759 AL138752.1-201ENST00000452964 351 ntBASIC1.65□□□□□ -2.15
CLK1P49759 RNU7-141P-201ENST00000459304 62 ntBASIC1.65□□□□□ -2.15
CLK1P49759 snoU13.15-201ENST00000459407 104 ntBASIC1.65□□□□□ -2.15
CLK1P49759 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.65□□□□□ -2.15
CLK1P49759 AC011406.1-201ENST00000512440 370 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms