Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNA5SP482-201ENST00000391269 118 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 RPL30P13-201ENST00000418873 348 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.35□□□□□ -2.19
NEDD4P46934 U8.19-201ENST00000459095 133 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AL049830.1-201ENST00000468034 425 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AC005908.1-201ENST00000468701 347 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AC099513.1-201ENST00000490423 301 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 RNU6-63P-201ENST00000516690 95 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AL442663.2-201ENST00000554385 511 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AC136932.1-201ENST00000574771 208 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AL513423.1-201ENST00000621695 132 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 AC095038.3-201ENST00000634439 195 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 MIR302D-201ENST00000362275 68 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 Y_RNA.216-201ENST00000364205 93 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 RNU6-450P-201ENST00000364654 107 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 RNU4-30P-201ENST00000410245 143 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 HMGN1P7-201ENST00000491722 313 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 RNU6-1143P-201ENST00000516125 104 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 RNU6-1046P-201ENST00000516538 107 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 SNORA40.15-201ENST00000516884 107 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.2
NEDD4P46934 MIR4680-201ENST00000580906 66 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 MIR4300-201ENST00000581016 96 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 AC005972.2-201ENST00000604690 348 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 RAC1P9-201ENST00000604990 392 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.34□□□□□ -2.2
NEDD4P46934 MIR376A1-201ENST00000616574 68 ntBASIC1.34□□□□□ -2.2
NEDD4P46934 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.34□□□□□ -2.2
NEDD4P46934 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.33□□□□□ -2.2
NEDD4P46934 SNORA1B-201ENST00000362535 133 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 SNORD1A-201ENST00000364968 72 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 Y_RNA.368-201ENST00000365547 113 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 Y_RNA.456-201ENST00000384232 111 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 STAG3L5P-204ENST00000443759 179 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 AC233266.1-201ENST00000454518 96 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 HMGN1P10-201ENST00000474557 553 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 RNU6-1291P-201ENST00000516591 104 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 AC113195.1-201ENST00000579952 141 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
NEDD4P46934 AC242852.1-201ENST00000612151 96 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 AC244015.1-201ENST00000622301 99 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 AC091895.1-201ENST00000624494 256 ntBASIC1.33□□□□□ -2.2
NEDD4P46934 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
NEDD4P46934 SNORD113-8-201ENST00000363497 74 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 RNU6-770P-201ENST00000363929 105 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 Y_RNA.222-201ENST00000364264 102 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 Y_RNA.383-201ENST00000383855 97 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 RNU6-985P-201ENST00000410182 104 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 RNU6-855P-201ENST00000410395 104 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 AL591704.2-201ENST00000421658 181 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 POLR2KP2-201ENST00000438155 177 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 RPS4XP11-201ENST00000446897 772 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 RPS20P10-201ENST00000451209 253 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 AC079140.2-201ENST00000506193 142 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 RNU6-397P-201ENST00000516226 104 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 DEFB117-201ENST00000602356 141 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 AC004832.4-201ENST00000608952 331 ntBASIC1.32□□□□□ -2.2
NEDD4P46934 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
NEDD4P46934 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 Y_RNA.341-201ENST00000365341 102 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 RNU6-1323P-201ENST00000384025 107 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 SNORD116-13-201ENST00000384408 92 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 Y_RNA.527-201ENST00000384573 102 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 MIR513A1-201ENST00000385138 129 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 RNU6-764P-201ENST00000516396 105 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 RNU6-1153P-201ENST00000516760 105 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 RNU7-116P-201ENST00000516940 62 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 MIR8063-201ENST00000621930 81 ntBASIC1.31□□□□□ -2.2
NEDD4P46934 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NEDD4P46934 RNU4-90P-201ENST00000362773 141 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 Y_RNA.172-201ENST00000363765 102 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 Y_RNA.214-201ENST00000364201 112 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 Y_RNA.310-201ENST00000365063 113 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 SNORA72-201ENST00000384339 132 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 MIR660-201ENST00000385235 97 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 SNORA12.1-201ENST00000390873 148 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.3□□□□□ -2.2
NEDD4P46934 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 OR9P1P-201ENST00000496431 281 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 RNU6-496P-201ENST00000516145 99 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 AC131281.1-201ENST00000522984 164 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 AC011604.1-201ENST00000545978 196 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.3□□□□□ -2.2
NEDD4P46934 SNORD3E-202ENST00000627253 216 ntBASIC1.3□□□□□ -2.2
NEDD4P46934 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NEDD4P46934 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
NEDD4P46934 Y_RNA.136-201ENST00000363444 102 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 Y_RNA.286-201ENST00000364813 102 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 RNU6-1065P-201ENST00000384513 106 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 RNU6-1011P-201ENST00000384668 107 ntBASIC1.29□□□□□ -2.2
NEDD4P46934 RNU6-1105P-201ENST00000384774 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms