Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PTPN9P43378 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PTPN9P43378 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.82-201ENST00000363000 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.92-201ENST00000363043 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.235-201ENST00000364412 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.306-201ENST00000365015 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.312-201ENST00000365089 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.322-201ENST00000365151 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.350-201ENST00000365409 98 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.478-201ENST00000384358 107 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 SNORA26.5-201ENST00000391215 123 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 RNU2-38P-201ENST00000410856 79 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.650-201ENST00000459002 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.777-201ENST00000516982 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.771-201ENST00000598668 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 Y_RNA.789-201ENST00000622480 102 ntBASIC1.8□□□□□ -2.12
PTPN9P43378 RNU6-144P-201ENST00000383951 107 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 RNU6-763P-201ENST00000390865 106 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 RNU6-440P-201ENST00000390882 105 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 SNORA26.9-201ENST00000391322 122 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 RNU7-141P-201ENST00000459304 62 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 Y_RNA.637-201ENST00000459424 114 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 SNORA31.10-201ENST00000516482 106 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 RNU2-56P-201ENST00000516826 190 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 AC024405.2-202ENST00000532731 184 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 AC011604.1-201ENST00000545978 196 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 AC104984.5-201ENST00000586878 94 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 POLR3GP1-201ENST00000594073 261 ntBASIC1.79□□□□□ -2.12
PTPN9P43378 SNORA1B-201ENST00000362535 133 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 U8.7-201ENST00000364940 136 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 Y_RNA.401-201ENST00000383965 117 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 Y_RNA.416-201ENST00000384014 113 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 RNU6-136P-201ENST00000384663 107 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 RNA5SP482-201ENST00000391269 118 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 SNORD58.1-201ENST00000391313 66 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 Y_RNA.618-201ENST00000410949 107 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 COX6CP10-201ENST00000416832 224 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 SNORD2.1-201ENST00000458762 69 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 MIR4709-201ENST00000577272 72 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 MIR4282-201ENST00000583613 67 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 AC013791.1-201ENST00000616619 62 ntBASIC1.78□□□□□ -2.12
PTPN9P43378 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PTPN9P43378 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
PTPN9P43378 Y_RNA.20-201ENST00000362479 113 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 RNU6-674P-201ENST00000363831 107 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 Y_RNA.267-201ENST00000364679 109 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 SNORA4.2-201ENST00000365313 147 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 RNU6-662P-201ENST00000384253 104 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 RNU6-574P-201ENST00000384265 107 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 RNU6-1031P-201ENST00000384773 107 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 MT-TG-201ENST00000387429 68 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PTPN9P43378 AL034345.1-201ENST00000407768 123 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 RNU2-14P-201ENST00000411053 191 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.77□□□□□ -2.13
PTPN9P43378 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.77□□□□□ -2.13
PTPN9P43378 RNU6-1291P-201ENST00000516591 104 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 MIR5688-201ENST00000580619 83 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 BX284668.6-201ENST00000606899 438 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.77□□□□□ -2.13
PTPN9P43378 MIR6715A-201ENST00000615929 79 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 MIR7843-201ENST00000622274 79 ntBASIC1.77□□□□□ -2.13
PTPN9P43378 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PTPN9P43378 RNU6-740P-201ENST00000364734 105 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 RNU6-1289P-201ENST00000384431 106 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 AL603910.2-201ENST00000407268 136 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.76□□□□□ -2.13
PTPN9P43378 AC117454.1-201ENST00000491120 168 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.76□□□□□ -2.13
PTPN9P43378 MIR5692C2-201ENST00000577959 77 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 AL929325.1-201ENST00000603096 117 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 AC103810.8-201ENST00000607347 118 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 snoU18.1-201ENST00000629629 71 ntBASIC1.76□□□□□ -2.13
PTPN9P43378 SNORA36B-201ENST00000410438 131 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 RPL30P13-201ENST00000418873 348 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 BTF3P11-201ENST00000426582 477 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 JTBP1-201ENST00000441314 247 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 AL049830.1-201ENST00000468034 425 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 RPL23AP54-201ENST00000495129 419 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.75□□□□□ -2.13
PTPN9P43378 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.75□□□□□ -2.13
PTPN9P43378 RNU6-1023P-201ENST00000516137 106 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 DEFB122-202ENST00000569013 197 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 AC005357.1-201ENST00000588399 301 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 AL008718.3-201ENST00000610217 321 ntBASIC1.75□□□□□ -2.13
PTPN9P43378 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 RNU6-1048P-201ENST00000364054 107 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 U8.5-201ENST00000364528 136 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 Y_RNA.265-201ENST00000364677 108 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 AC233266.1-201ENST00000454518 96 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 RNU7-34P-201ENST00000459394 64 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 RNU6-437P-201ENST00000459408 95 ntBASIC1.74□□□□□ -2.13
PTPN9P43378 OR9P1P-201ENST00000496431 281 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms