Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.99□□□□□ -2.57
HTTP42858 SNORD45.4-201ENST00000516629 73 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU4-18P-201ENST00000516751 149 ntBASIC-0.99□□□□□ -2.57
HTTP42858 AC087883.1-201ENST00000551882 391 ntBASIC-0.99□□□□□ -2.57
HTTP42858 DISC2.1-201ENST00000612827 205 ntBASIC-0.99□□□□□ -2.57
HTTP42858 AC099654.8-201ENST00000637757 681 ntBASIC-0.99□□□□□ -2.57
HTTP42858 RNU6-384P-201ENST00000364900 104 ntBASIC-1□□□□□ -2.57
HTTP42858 RNU6-702P-201ENST00000364982 107 ntBASIC-1□□□□□ -2.57
HTTP42858 SNORA75B-201ENST00000384053 137 ntBASIC-1□□□□□ -2.57
HTTP42858 Y_RNA.497-201ENST00000384447 98 ntBASIC-1□□□□□ -2.57
HTTP42858 MIRLET7F2-201ENST00000385277 83 ntBASIC-1□□□□□ -2.57
HTTP42858 SNORD12C-201ENST00000386307 89 ntBASIC-1□□□□□ -2.57
HTTP42858 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1□□□□□ -2.57
HTTP42858 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1□□□□□ -2.57
HTTP42858 AC026414.1-201ENST00000504046 698 ntBASIC-1□□□□□ -2.57
HTTP42858 Y_RNA.689-201ENST00000516589 107 ntBASIC-1□□□□□ -2.57
HTTP42858 AL512286.1-201ENST00000439244 400 ntBASIC-1□□□□□ -2.57
HTTP42858 AC091133.4-201ENST00000511142 308 ntBASIC-1□□□□□ -2.57
HTTP42858 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1□□□□□ -2.57
HTTP42858 AC245505.1-201ENST00000556398 224 ntBASIC-1□□□□□ -2.57
HTTP42858 RNU6-1115P-201ENST00000362490 106 ntBASIC-1□□□□□ -2.57
HTTP42858 RNU6-216P-201ENST00000363282 104 ntBASIC-1□□□□□ -2.57
HTTP42858 Y_RNA.450-201ENST00000384198 113 ntBASIC-1□□□□□ -2.57
HTTP42858 RNU6-784P-201ENST00000384330 106 ntBASIC-1□□□□□ -2.57
HTTP42858 RNU6-1179P-201ENST00000384667 107 ntBASIC-1□□□□□ -2.57
HTTP42858 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1□□□□□ -2.57
HTTP42858 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1□□□□□ -2.57
HTTP42858 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1□□□□□ -2.57
HTTP42858 UQCRBP2-201ENST00000447827 297 ntBASIC-1□□□□□ -2.57
HTTP42858 RNU7-74P-201ENST00000459104 62 ntBASIC-1□□□□□ -2.57
HTTP42858 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1□□□□□ -2.57
HTTP42858 MIR5692A1-201ENST00000580523 69 ntBASIC-1□□□□□ -2.57
HTTP42858 MIR4293-201ENST00000584305 78 ntBASIC-1□□□□□ -2.57
HTTP42858 AC023510.2-201ENST00000622162 746 ntBASIC-1□□□□□ -2.57
HTTP42858 SNORA43.4-201ENST00000629559 138 ntBASIC-1□□□□□ -2.57
HTTP42858 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.01□□□□□ -2.57
HTTP42858 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
HTTP42858 MIR889-201ENST00000401280 79 ntBASIC-1.01□□□□□ -2.57
HTTP42858 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.01□□□□□ -2.57
HTTP42858 AL358944.1-201ENST00000528537 144 ntBASIC-1.01□□□□□ -2.57
HTTP42858 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.01□□□□□ -2.57
HTTP42858 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.01□□□□□ -2.57
HTTP42858 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.01□□□□□ -2.57
HTTP42858 RNU6-343P-201ENST00000364709 104 ntBASIC-1.01□□□□□ -2.57
HTTP42858 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.01□□□□□ -2.57
HTTP42858 MIR147A-201ENST00000385079 72 ntBASIC-1.01□□□□□ -2.57
HTTP42858 COX7BP2-201ENST00000437976 242 ntBASIC-1.01□□□□□ -2.57
HTTP42858 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.01□□□□□ -2.57
HTTP42858 RNU6-175P-201ENST00000516896 107 ntBASIC-1.01□□□□□ -2.57
HTTP42858 MTND1P24-201ENST00000552175 861 ntBASIC-1.01□□□□□ -2.57
HTTP42858 AP000907.4-201ENST00000604143 237 ntBASIC-1.01□□□□□ -2.57
HTTP42858 AL512506.1-201ENST00000613918 449 ntBASIC-1.01□□□□□ -2.57
HTTP42858 RNU6-228P-201ENST00000362700 106 ntBASIC-1.02□□□□□ -2.57
HTTP42858 RNU6-853P-201ENST00000364306 107 ntBASIC-1.02□□□□□ -2.57
HTTP42858 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.02□□□□□ -2.57
HTTP42858 SNORD38B-201ENST00000384690 67 ntBASIC-1.02□□□□□ -2.57
HTTP42858 AC012306.1-201ENST00000423267 114 ntBASIC-1.02□□□□□ -2.57
HTTP42858 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.02□□□□□ -2.57
HTTP42858 AC072039.2-201ENST00000608883 439 ntBASIC-1.02□□□□□ -2.57
HTTP42858 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.02□□□□□ -2.57
HTTP42858 RNU6-484P-201ENST00000384016 107 ntBASIC-1.02□□□□□ -2.57
HTTP42858 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.02□□□□□ -2.57
HTTP42858 MIR181B2-201ENST00000385004 89 ntBASIC-1.02□□□□□ -2.57
HTTP42858 MIR452-201ENST00000385020 85 ntBASIC-1.02□□□□□ -2.57
HTTP42858 RNU2-8P-201ENST00000410727 190 ntBASIC-1.02□□□□□ -2.57
HTTP42858 AC005178.1-201ENST00000508392 440 ntBASIC-1.02□□□□□ -2.57
HTTP42858 AC021451.1-201ENST00000523498 1129 ntBASIC-1.02□□□□□ -2.57
HTTP42858 MIR522-201ENST00000385071 87 ntBASIC-1.02□□□□□ -2.57
HTTP42858 SNRPGP7-201ENST00000469016 106 ntBASIC-1.02□□□□□ -2.57
HTTP42858 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.02□□□□□ -2.57
HTTP42858 RNU6-410P-201ENST00000517006 107 ntBASIC-1.02□□□□□ -2.57
HTTP42858 AL391834.2-201ENST00000609982 546 ntBASIC-1.02□□□□□ -2.57
HTTP42858 AL445264.1-201ENST00000621719 171 ntBASIC-1.02□□□□□ -2.57
HTTP42858 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.03□□□□□ -2.57
HTTP42858 RNU6-839P-201ENST00000363347 108 ntBASIC-1.03□□□□□ -2.57
HTTP42858 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.03□□□□□ -2.57
HTTP42858 RNU4-83P-201ENST00000410863 133 ntBASIC-1.03□□□□□ -2.57
HTTP42858 RNU6-564P-201ENST00000410983 104 ntBASIC-1.03□□□□□ -2.57
HTTP42858 AC022028.1-201ENST00000412054 408 ntBASIC-1.03□□□□□ -2.57
HTTP42858 RPL23AP30-201ENST00000432419 501 ntBASIC-1.03□□□□□ -2.57
HTTP42858 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.03□□□□□ -2.57
HTTP42858 SERF1AP1-201ENST00000514575 187 ntBASIC-1.03□□□□□ -2.57
HTTP42858 MIR4666A-201ENST00000580160 79 ntBASIC-1.03□□□□□ -2.57
HTTP42858 SNORA63.5-201ENST00000363548 123 ntBASIC-1.03□□□□□ -2.57
HTTP42858 RNU6-324P-201ENST00000363957 106 ntBASIC-1.03□□□□□ -2.57
HTTP42858 EPS15P1-201ENST00000448836 336 ntBASIC-1.03□□□□□ -2.57
HTTP42858 RNU7-67P-201ENST00000459003 62 ntBASIC-1.03□□□□□ -2.57
HTTP42858 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.03□□□□□ -2.57
HTTP42858 MIR4473-201ENST00000583731 91 ntBASIC-1.03□□□□□ -2.57
HTTP42858 AC022893.3-201ENST00000607665 437 ntBASIC-1.03□□□□□ -2.57
HTTP42858 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.03□□□□□ -2.57
HTTP42858 MIR6818-201ENST00000621576 65 ntBASIC-1.03□□□□□ -2.57
HTTP42858 SNORA27.3-201ENST00000364937 134 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.04□□□□□ -2.58
HTTP42858 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.04□□□□□ -2.58
HTTP42858 MTCO1P31-201ENST00000506355 492 ntBASIC-1.04□□□□□ -2.58
HTTP42858 MIR4423-201ENST00000580922 80 ntBASIC-1.04□□□□□ -2.58
HTTP42858 AL445584.3-201ENST00000617173 78 ntBASIC-1.04□□□□□ -2.58
HTTP42858 AC103706.2-201ENST00000638080 240 ntBASIC-1.04□□□□□ -2.58
HTTP42858 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms