Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 SNORA1B-201ENST00000362535 133 ntBASIC1.77□□□□□ -2.13
RPL3P39023 Y_RNA.200-201ENST00000364018 102 ntBASIC1.77□□□□□ -2.13
RPL3P39023 Y_RNA.267-201ENST00000364679 109 ntBASIC1.77□□□□□ -2.13
RPL3P39023 SNORA4.2-201ENST00000365313 147 ntBASIC1.77□□□□□ -2.13
RPL3P39023 RNU6-1080P-201ENST00000383982 107 ntBASIC1.77□□□□□ -2.13
RPL3P39023 Y_RNA.572-201ENST00000384757 98 ntBASIC1.77□□□□□ -2.13
RPL3P39023 SNORA12.1-201ENST00000390873 148 ntBASIC1.77□□□□□ -2.13
RPL3P39023 RNU2-2P-201ENST00000410396 191 ntBASIC1.77□□□□□ -2.13
RPL3P39023 RNU6-847P-201ENST00000411115 108 ntBASIC1.77□□□□□ -2.13
RPL3P39023 RPL23AP54-201ENST00000495129 419 ntBASIC1.77□□□□□ -2.13
RPL3P39023 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.77□□□□□ -2.13
RPL3P39023 RNU6-138P-201ENST00000515952 107 ntBASIC1.77□□□□□ -2.13
RPL3P39023 RNU7-116P-201ENST00000516940 62 ntBASIC1.77□□□□□ -2.13
RPL3P39023 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.77□□□□□ -2.13
RPL3P39023 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
RPL3P39023 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
RPL3P39023 RNU6-1205P-201ENST00000363625 106 ntBASIC1.76□□□□□ -2.13
RPL3P39023 Y_RNA.515-201ENST00000384535 112 ntBASIC1.76□□□□□ -2.13
RPL3P39023 MIR17-201ENST00000385012 84 ntBASIC1.76□□□□□ -2.13
RPL3P39023 RNU6-383P-201ENST00000410864 94 ntBASIC1.76□□□□□ -2.13
RPL3P39023 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
RPL3P39023 AC245047.3-201ENST00000429428 127 ntBASIC1.76□□□□□ -2.13
RPL3P39023 HSPE1P9-201ENST00000440046 311 ntBASIC1.76□□□□□ -2.13
RPL3P39023 COX6CP14-201ENST00000469580 174 ntBASIC1.76□□□□□ -2.13
RPL3P39023 SNORA31.10-201ENST00000516482 106 ntBASIC1.76□□□□□ -2.13
RPL3P39023 AC091544.4-201ENST00000555268 342 ntBASIC1.76□□□□□ -2.13
RPL3P39023 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.76□□□□□ -2.13
RPL3P39023 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPL3P39023 MIR411-201ENST00000362239 96 ntBASIC1.75□□□□□ -2.13
RPL3P39023 Y_RNA.199-201ENST00000364014 102 ntBASIC1.75□□□□□ -2.13
RPL3P39023 RNU6-200P-201ENST00000364743 107 ntBASIC1.75□□□□□ -2.13
RPL3P39023 Y_RNA.293-201ENST00000364908 93 ntBASIC1.75□□□□□ -2.13
RPL3P39023 MIR1278-201ENST00000408753 81 ntBASIC1.75□□□□□ -2.13
RPL3P39023 AC233266.1-201ENST00000454518 96 ntBASIC1.75□□□□□ -2.13
RPL3P39023 RNU6-437P-201ENST00000459408 95 ntBASIC1.75□□□□□ -2.13
RPL3P39023 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.75□□□□□ -2.13
RPL3P39023 SNORA31.17-201ENST00000516953 127 ntBASIC1.75□□□□□ -2.13
RPL3P39023 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
RPL3P39023 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
RPL3P39023 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
RPL3P39023 AC078899.2-201ENST00000595282 212 ntBASIC1.75□□□□□ -2.13
RPL3P39023 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL3P39023 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL3P39023 AC242852.1-201ENST00000612151 96 ntBASIC1.75□□□□□ -2.13
RPL3P39023 U1.36-201ENST00000620684 176 ntBASIC1.75□□□□□ -2.13
RPL3P39023 AC244015.1-201ENST00000622301 99 ntBASIC1.75□□□□□ -2.13
RPL3P39023 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPL3P39023 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL3P39023 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
RPL3P39023 snoU2_19.4-201ENST00000364329 80 ntBASIC1.74□□□□□ -2.13
RPL3P39023 Y_RNA.308-201ENST00000365043 101 ntBASIC1.74□□□□□ -2.13
RPL3P39023 MIR520A-201ENST00000384862 85 ntBASIC1.74□□□□□ -2.13
RPL3P39023 RNU6-907P-201ENST00000390924 102 ntBASIC1.74□□□□□ -2.13
RPL3P39023 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
RPL3P39023 RNU7-94P-201ENST00000459576 63 ntBASIC1.74□□□□□ -2.13
RPL3P39023 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
RPL3P39023 MIR514B-201ENST00000516774 80 ntBASIC1.74□□□□□ -2.13
RPL3P39023 MIR4648-201ENST00000580107 72 ntBASIC1.74□□□□□ -2.13
RPL3P39023 MIR4308-201ENST00000580634 81 ntBASIC1.74□□□□□ -2.13
RPL3P39023 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.74□□□□□ -2.13
RPL3P39023 MIR8054-201ENST00000620877 86 ntBASIC1.74□□□□□ -2.13
RPL3P39023 Y_RNA.83-201ENST00000363005 113 ntBASIC1.73□□□□□ -2.13
RPL3P39023 RNU6-674P-201ENST00000363831 107 ntBASIC1.73□□□□□ -2.13
RPL3P39023 Y_RNA.262-201ENST00000364641 102 ntBASIC1.73□□□□□ -2.13
RPL3P39023 RNU6-923P-201ENST00000364753 107 ntBASIC1.73□□□□□ -2.13
RPL3P39023 RNU6-47P-201ENST00000383866 107 ntBASIC1.73□□□□□ -2.13
RPL3P39023 RNU6-144P-201ENST00000383951 107 ntBASIC1.73□□□□□ -2.13
RPL3P39023 MIR626-201ENST00000385032 94 ntBASIC1.73□□□□□ -2.13
RPL3P39023 RNU6-440P-201ENST00000390882 105 ntBASIC1.73□□□□□ -2.13
RPL3P39023 AL158823.1-201ENST00000418441 478 ntBASIC1.73□□□□□ -2.13
RPL3P39023 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
RPL3P39023 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL3P39023 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPL3P39023 Y_RNA.802-201ENST00000614892 130 ntBASIC1.73□□□□□ -2.13
RPL3P39023 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.73□□□□□ -2.13
RPL3P39023 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.73□□□□□ -2.13
RPL3P39023 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL3P39023 Y_RNA.24-201ENST00000362508 103 ntBASIC1.72□□□□□ -2.13
RPL3P39023 U8.2-201ENST00000363156 134 ntBASIC1.72□□□□□ -2.13
RPL3P39023 Y_RNA.203-201ENST00000364106 102 ntBASIC1.72□□□□□ -2.13
RPL3P39023 Y_RNA.796-201ENST00000364268 102 ntBASIC1.72□□□□□ -2.13
RPL3P39023 RNU4-41P-201ENST00000364426 143 ntBASIC1.72□□□□□ -2.13
RPL3P39023 Y_RNA.253-201ENST00000364562 112 ntBASIC1.72□□□□□ -2.13
RPL3P39023 Y_RNA.297-201ENST00000364950 91 ntBASIC1.72□□□□□ -2.13
RPL3P39023 Y_RNA.799-201ENST00000364992 102 ntBASIC1.72□□□□□ -2.13
RPL3P39023 SNORA8.3-201ENST00000384679 139 ntBASIC1.72□□□□□ -2.13
RPL3P39023 MIR526A2-201ENST00000390198 65 ntBASIC1.72□□□□□ -2.13
RPL3P39023 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RPL3P39023 RNU11-5P-201ENST00000391216 129 ntBASIC1.72□□□□□ -2.13
RPL3P39023 RNU6-493P-201ENST00000391321 108 ntBASIC1.72□□□□□ -2.13
RPL3P39023 Y_RNA.621-201ENST00000411065 96 ntBASIC1.72□□□□□ -2.13
RPL3P39023 AC009310.1-201ENST00000414414 451 ntBASIC1.72□□□□□ -2.13
RPL3P39023 AC069257.2-201ENST00000441819 155 ntBASIC1.72□□□□□ -2.13
RPL3P39023 AL358944.1-201ENST00000528537 144 ntBASIC1.72□□□□□ -2.13
RPL3P39023 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL3P39023 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
RPL3P39023 CBX3P4-201ENST00000538909 354 ntBASIC1.72□□□□□ -2.13
RPL3P39023 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
RPL3P39023 SNRPGP19-201ENST00000603826 189 ntBASIC1.72□□□□□ -2.13
RPL3P39023 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms