Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 RNU6-346P-201ENST00000516288 111 ntBASIC2.3□□□□□ -2.04
PTPN7P35236 MIR4446-201ENST00000578505 67 ntBASIC2.3□□□□□ -2.04
PTPN7P35236 AL049861.1-201ENST00000603130 150 ntBASIC2.3□□□□□ -2.04
PTPN7P35236 AC022217.4-201ENST00000604389 163 ntBASIC2.3□□□□□ -2.04
PTPN7P35236 SNORD14A-201ENST00000606526 91 ntBASIC2.3□□□□□ -2.04
PTPN7P35236 AC242852.1-201ENST00000612151 96 ntBASIC2.3□□□□□ -2.04
PTPN7P35236 AC244015.1-201ENST00000622301 99 ntBASIC2.3□□□□□ -2.04
PTPN7P35236 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PTPN7P35236 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN7P35236 SNORD45.3-201ENST00000363836 72 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 Y_RNA.267-201ENST00000364679 109 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 SNORD116-18-201ENST00000383961 92 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 MIR562-201ENST00000384894 95 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 RNU11-3P-201ENST00000391111 133 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN7P35236 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 uc_338.4-201ENST00000616635 176 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN7P35236 FO624990.1-201ENST00000636373 85 ntBASIC2.29□□□□□ -2.04
PTPN7P35236 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN7P35236 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN7P35236 AC245060.5-201ENST00000610778 3293 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 SNORA1B-201ENST00000362535 133 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 Y_RNA.253-201ENST00000364562 112 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 RNU6-449P-201ENST00000383914 107 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 RNU6-484P-201ENST00000384016 107 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 RNU6-643P-201ENST00000384018 107 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 MIR524-201ENST00000385242 87 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 RNA5SP465-201ENST00000391195 109 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 SNORA11.4-201ENST00000408823 129 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 Y_RNA.621-201ENST00000411065 96 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 Y_RNA.622-201ENST00000411091 108 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 AC107027.2-201ENST00000512197 115 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 AC084364.2-201ENST00000546924 395 ntBASIC2.28□□□□□ -2.04
PTPN7P35236 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTPN7P35236 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.28□□□□□ -2.05
PTPN7P35236 Y_RNA.111-201ENST00000363248 100 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 RNU6-818P-201ENST00000364837 108 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 RNU2-55P-201ENST00000411146 174 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 AC245047.4-201ENST00000433189 144 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 NDUFA4P2-201ENST00000489989 244 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 HMGN1P7-201ENST00000491722 313 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 SNORD77.4-201ENST00000516158 81 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 AP002004.2-201ENST00000531656 154 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 MTND1P7-201ENST00000632801 297 ntBASIC2.27□□□□□ -2.05
PTPN7P35236 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
PTPN7P35236 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PTPN7P35236 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTPN7P35236 SNORA3A-201ENST00000364113 130 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 RNU6-1019P-201ENST00000364424 107 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PTPN7P35236 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 SCARNA16.3-201ENST00000516595 184 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 MIR5094-201ENST00000578766 85 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 AL049779.4-201ENST00000604500 156 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 AC069114.2-201ENST00000604699 304 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 AL591926.4-201ENST00000616895 298 ntBASIC2.26□□□□□ -2.05
PTPN7P35236 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTPN7P35236 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.25□□□□□ -2.05
PTPN7P35236 RNA5SP109-201ENST00000391010 116 ntBASIC2.25□□□□□ -2.05
PTPN7P35236 AC006461.1-201ENST00000412637 326 ntBASIC2.25□□□□□ -2.05
PTPN7P35236 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.25□□□□□ -2.05
PTPN7P35236 RNVU1-2-201ENST00000516326 135 ntBASIC2.25□□□□□ -2.05
PTPN7P35236 RNU6-406P-201ENST00000516470 107 ntBASIC2.25□□□□□ -2.05
PTPN7P35236 JPX_2.1-201ENST00000614161 69 ntBASIC2.25□□□□□ -2.05
PTPN7P35236 Y_RNA.778-201ENST00000620203 90 ntBASIC2.25□□□□□ -2.05
PTPN7P35236 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
PTPN7P35236 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PTPN7P35236 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PTPN7P35236 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PTPN7P35236 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTPN7P35236 RNA5SP289-201ENST00000362332 137 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 Y_RNA.337-201ENST00000365312 102 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 RNU6-1138P-201ENST00000365359 106 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 Y_RNA.400-201ENST00000383963 111 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 SNORA48.1-201ENST00000390879 135 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 NDUFB4P4-201ENST00000404822 243 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 SNRPGP10-201ENST00000432323 225 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 AL049830.1-201ENST00000468034 425 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PTPN7P35236 RNU7-149P-201ENST00000516739 59 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 SNORA31.25-201ENST00000517242 134 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 AL160236.1-201ENST00000556317 195 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 AC245884.12-201ENST00000615364 59 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 MIR3658-201ENST00000636291 56 ntBASIC2.24□□□□□ -2.05
PTPN7P35236 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPN7P35236 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PTPN7P35236 AL136360.1-201ENST00000503377 1900 ntBASIC2.23□□□□□ -2.05
PTPN7P35236 SNORD50.2-201ENST00000365465 70 ntBASIC2.23□□□□□ -2.05
PTPN7P35236 Y_RNA.432-201ENST00000384087 111 ntBASIC2.23□□□□□ -2.05
PTPN7P35236 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PTPN7P35236 RNA5SP270-201ENST00000411361 118 ntBASIC2.23□□□□□ -2.05
PTPN7P35236 AC245047.3-201ENST00000429428 127 ntBASIC2.23□□□□□ -2.05
PTPN7P35236 AC011753.1-201ENST00000451001 220 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms