Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 MIR1267-201ENST00000408723 78 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNU2-14P-201ENST00000411053 191 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXA13P31271 AL390729.2-201ENST00000416137 156 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNU7-95P-201ENST00000459222 64 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RPL39P38-201ENST00000467018 153 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNU7-99P-201ENST00000516271 62 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNU6-1271P-201ENST00000517049 105 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNU7-172P-201ENST00000517125 64 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNU7-128P-201ENST00000517247 62 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 MIR4709-201ENST00000577272 72 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 AC073413.2-201ENST00000604332 360 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 AC006435.5-201ENST00000624486 112 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HOXA13P31271 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HOXA13P31271 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HOXA13P31271 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXA13P31271 Y_RNA.54-201ENST00000362766 105 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 RNU6-379P-201ENST00000363813 104 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 RNU6-740P-201ENST00000364734 105 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 RNU6-376P-201ENST00000384731 106 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 RNU6-360P-201ENST00000390944 104 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 RPL31P63-201ENST00000422565 375 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 FTH1P12-201ENST00000432137 551 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 snoU13.27-201ENST00000459278 104 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
HOXA13P31271 DNAJC19P9-201ENST00000555084 351 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 MIR4498-201ENST00000577599 66 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 AC006006.1-201ENST00000603082 144 ntBASIC1.73□□□□□ -2.13
HOXA13P31271 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HOXA13P31271 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
HOXA13P31271 MIR335-201ENST00000362173 94 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 SNORA25.1-201ENST00000362326 128 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 Y_RNA.76-201ENST00000362931 109 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 Y_RNA.188-201ENST00000363952 111 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 RNU6-326P-201ENST00000365480 107 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXA13P31271 Y_RNA.401-201ENST00000383965 117 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 SNORA26.5-201ENST00000391215 123 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 MIR873-201ENST00000401120 77 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 AC010154.1-201ENST00000425857 269 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 RPS26P55-201ENST00000471178 356 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 AC097462.1-201ENST00000514125 324 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 RNU6-1337P-201ENST00000516525 95 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 RNU6-388P-201ENST00000517012 105 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 RNU6-389P-201ENST00000517048 105 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.72□□□□□ -2.13
HOXA13P31271 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXA13P31271 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXA13P31271 AC090425.1-201ENST00000610007 140 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 AC078938.1-201ENST00000620993 318 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXA13P31271 U6.108-201ENST00000637764 58 ntBASIC1.72□□□□□ -2.13
HOXA13P31271 RNU6-801P-201ENST00000364087 105 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HOXA13P31271 MIR1304-201ENST00000408243 91 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 AL354695.1-201ENST00000427935 228 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 AC245047.3-201ENST00000429428 127 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 snoU13.9-201ENST00000458927 103 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 RNU6-111P-201ENST00000517179 105 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.71□□□□□ -2.14
HOXA13P31271 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 AC134026.1-201ENST00000623249 2239 ntBASIC1.71□□□□□ -2.14
HOXA13P31271 MIR424-201ENST00000362227 98 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 Y_RNA.44-201ENST00000362676 108 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU1-22P-201ENST00000363334 158 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 Y_RNA.217-201ENST00000364214 105 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 Y_RNA.269-201ENST00000364685 89 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 Y_RNA.275-201ENST00000364726 110 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6-117P-201ENST00000365415 107 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 Y_RNA.416-201ENST00000384014 113 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6-950P-201ENST00000384651 107 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6-136P-201ENST00000384663 107 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6-763P-201ENST00000390865 106 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 SNORA53-201ENST00000391141 249 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU11-5P-201ENST00000391216 129 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6-855P-201ENST00000410395 104 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 HSPE1P21-201ENST00000438283 308 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 AL606517.2-201ENST00000442855 241 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 Y_RNA.641-201ENST00000459414 105 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU7-94P-201ENST00000459576 63 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RPS26P45-201ENST00000471748 340 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 SNORD116-28-201ENST00000516123 91 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6-1278P-201ENST00000516130 107 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 SNORA31.24-201ENST00000517232 57 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.7□□□□□ -2.14
HOXA13P31271 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 AC004832.4-201ENST00000608952 331 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 AL008718.3-201ENST00000610217 321 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 MIR8063-201ENST00000621930 81 ntBASIC1.7□□□□□ -2.14
HOXA13P31271 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXA13P31271 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HOXA13P31271 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HOXA13P31271 RNU6-1272P-201ENST00000362776 107 ntBASIC1.69□□□□□ -2.14
HOXA13P31271 Y_RNA.267-201ENST00000364679 109 ntBASIC1.69□□□□□ -2.14
HOXA13P31271 Y_RNA.310-201ENST00000365063 113 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms