Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 Y_RNA.238-201ENST00000364441 102 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU6-1240P-201ENST00000365155 104 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU6-418P-201ENST00000384035 107 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 Y_RNA.580-201ENST00000391004 95 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU6-482P-201ENST00000391068 107 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNA5SP465-201ENST00000391195 109 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU6-1135P-201ENST00000411083 103 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 SRIP3-201ENST00000413200 219 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 AC010154.1-201ENST00000425857 269 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 MTND2P29-201ENST00000438595 412 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RPS29P11-201ENST00000496507 171 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA11P31270 RN7SKP164-201ENST00000516138 266 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU7-115P-201ENST00000516433 55 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU6-1337P-201ENST00000516525 95 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU6-965P-201ENST00000516721 96 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
HOXA11P31270 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HOXA11P31270 RNU6-103P-201ENST00000363686 107 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 RNU6-438P-201ENST00000365561 103 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 SNORD14D-201ENST00000384390 87 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 Y_RNA.506-201ENST00000384494 102 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 RN7SKP51-201ENST00000410781 304 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 RNU4-61P-201ENST00000411243 107 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 AC244636.1-201ENST00000421152 228 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 RNA5SP20-201ENST00000515976 84 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 Y_RNA.703-201ENST00000516846 111 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 AL353997.5-201ENST00000618886 171 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.03□□□□□ -2.08
HOXA11P31270 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HOXA11P31270 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXA11P31270 Y_RNA.170-201ENST00000363746 110 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 snoU2_19.4-201ENST00000364329 80 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 Y_RNA.412-201ENST00000384001 104 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 SNORD116-13-201ENST00000384408 92 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 RNU6-125P-201ENST00000384505 107 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 SNORA8.3-201ENST00000384679 139 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 RNA5SP212-201ENST00000391223 107 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 RNU5E-9P-201ENST00000411164 104 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 RNU1-131P-201ENST00000458943 161 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 RNU7-116P-201ENST00000516940 62 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 AC127455.1-201ENST00000565496 145 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 AL353149.1-201ENST00000610667 244 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 AL391903.3-201ENST00000612158 163 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 Y_RNA.802-201ENST00000614892 130 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 MIR548AY-201ENST00000617669 107 ntBASIC2.02□□□□□ -2.09
HOXA11P31270 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXA11P31270 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXA11P31270 Y_RNA.99-201ENST00000363138 105 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNU1-22P-201ENST00000363334 158 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNU6-674P-201ENST00000363831 107 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNU1-96P-201ENST00000364163 162 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNU6-275P-201ENST00000364910 107 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 U8.7-201ENST00000364940 136 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 SNORD50.2-201ENST00000365465 70 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 MIR616-201ENST00000385293 97 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 MTCO2P33-201ENST00000402100 465 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 MIR1278-201ENST00000408753 81 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 RNA5SP489-201ENST00000410986 109 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXA11P31270 AL162725.1-201ENST00000435405 301 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXA11P31270 RNU7-200P-201ENST00000516105 62 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 MIR3144-201ENST00000579460 79 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 AC005972.2-201ENST00000604690 348 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 U1.36-201ENST00000620684 176 ntBASIC2.01□□□□□ -2.09
HOXA11P31270 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
HOXA11P31270 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXA11P31270 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXA11P31270 RNU1-17P-201ENST00000363022 152 ntBASIC2□□□□□ -2.09
HOXA11P31270 RNA5SP37-201ENST00000365420 130 ntBASIC2□□□□□ -2.09
HOXA11P31270 AC097462.1-201ENST00000514125 324 ntBASIC2□□□□□ -2.09
HOXA11P31270 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2□□□□□ -2.09
HOXA11P31270 AC021753.1-201ENST00000635724 168 ntBASIC2□□□□□ -2.09
HOXA11P31270 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2□□□□□ -2.09
HOXA11P31270 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXA11P31270 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXA11P31270 RNU6-1205P-201ENST00000363625 106 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 RNU4-84P-201ENST00000364200 139 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 EBAG9P1-201ENST00000418955 543 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 AC060773.1-201ENST00000421698 310 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 AL603825.1-201ENST00000438481 80 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 RNA5SP57-201ENST00000459463 123 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 AC091021.1-201ENST00000468051 388 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXA11P31270 AC015720.1-201ENST00000565251 277 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 MIR4744-201ENST00000581563 82 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 RNU2-4P-201ENST00000606190 192 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 AL021707.8-201ENST00000609428 183 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 U6.73-201ENST00000619194 103 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms