Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
EPHA3P29320 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
EPHA3P29320 RNA5SP289-201ENST00000362332 137 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 Y_RNA.203-201ENST00000364106 102 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 RNU4-41P-201ENST00000364426 143 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
EPHA3P29320 RNU6-381P-201ENST00000391259 108 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.04□□□□□ -2.08
EPHA3P29320 AC245047.8-201ENST00000456455 284 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
EPHA3P29320 RNU6-182P-201ENST00000516970 105 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.04□□□□□ -2.08
EPHA3P29320 RNU2-4P-201ENST00000606190 192 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
EPHA3P29320 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
EPHA3P29320 RNU6-112P-201ENST00000363599 104 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 RNU6-674P-201ENST00000363831 107 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 SNORA4.2-201ENST00000365313 147 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 PIGPP3-201ENST00000425307 415 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.03□□□□□ -2.08
EPHA3P29320 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.03□□□□□ -2.08
EPHA3P29320 RNU6-453P-201ENST00000516819 85 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 RNU2-56P-201ENST00000516826 190 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 RNA5SP437-201ENST00000517249 129 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 AP002004.2-201ENST00000531656 154 ntBASIC2.03□□□□□ -2.08
EPHA3P29320 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
EPHA3P29320 ZNF702P-202ENST00000434269 1966 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 Y_RNA.229-201ENST00000364347 113 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 SNORA63D-201ENST00000364359 132 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 MIR520A-201ENST00000384862 85 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 MIR562-201ENST00000384894 95 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 MT-TT-201ENST00000387460 66 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 RNU2-7P-201ENST00000410794 178 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 AC069257.2-201ENST00000441819 155 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.02□□□□□ -2.09
EPHA3P29320 AL049830.1-201ENST00000468034 425 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 SCARNA8-201ENST00000515924 131 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 RPL23AP91-201ENST00000569211 455 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 MIR4298-201ENST00000584380 73 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 MIR8054-201ENST00000620877 86 ntBASIC2.02□□□□□ -2.09
EPHA3P29320 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
EPHA3P29320 Y_RNA.7-201ENST00000362352 102 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNU6-1209P-201ENST00000363655 107 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 Y_RNA.238-201ENST00000364441 102 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 Y_RNA.253-201ENST00000364562 112 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNA5SP126-201ENST00000365092 109 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNU6-296P-201ENST00000384608 107 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 Y_RNA.571-201ENST00000384753 98 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNA5SP100-201ENST00000410903 110 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNA5SP59-201ENST00000410922 110 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 HSPE1P9-201ENST00000440046 311 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.01□□□□□ -2.09
EPHA3P29320 RPL23AP63-201ENST00000498752 471 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 SNORA31.10-201ENST00000516482 106 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNU6-1007P-201ENST00000516586 107 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 AL358944.1-201ENST00000528537 144 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 AL590808.1-201ENST00000618696 141 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.01□□□□□ -2.09
EPHA3P29320 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
EPHA3P29320 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
EPHA3P29320 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
EPHA3P29320 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
EPHA3P29320 Y_RNA.796-201ENST00000364268 102 ntBASIC2□□□□□ -2.09
EPHA3P29320 Y_RNA.233-201ENST00000364407 101 ntBASIC2□□□□□ -2.09
EPHA3P29320 Y_RNA.799-201ENST00000364992 102 ntBASIC2□□□□□ -2.09
EPHA3P29320 RNU4-70P-201ENST00000384579 139 ntBASIC2□□□□□ -2.09
EPHA3P29320 RNU7-120P-201ENST00000459334 63 ntBASIC2□□□□□ -2.09
EPHA3P29320 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
EPHA3P29320 RN7SKP164-201ENST00000516138 266 ntBASIC2□□□□□ -2.09
EPHA3P29320 RNU6-861P-201ENST00000516745 106 ntBASIC2□□□□□ -2.09
EPHA3P29320 MIR5688-201ENST00000580619 83 ntBASIC2□□□□□ -2.09
EPHA3P29320 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
EPHA3P29320 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2□□□□□ -2.09
EPHA3P29320 AL591926.4-201ENST00000616895 298 ntBASIC2□□□□□ -2.09
EPHA3P29320 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2□□□□□ -2.09
EPHA3P29320 MIR126-201ENST00000362291 85 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 Y_RNA.150-201ENST00000363562 102 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 Y_RNA.265-201ENST00000364677 108 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 MIR616-201ENST00000385293 97 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 RN7SKP51-201ENST00000410781 304 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 MLLT10P1-201ENST00000418346 262 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 STAG3L5P-204ENST00000443759 179 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 RN7SL429P-201ENST00000479090 223 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 RN7SL489P-201ENST00000486185 223 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 RN7SL327P-201ENST00000488659 223 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 RNU6-1219P-201ENST00000516143 112 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
EPHA3P29320 MIR2681-201ENST00000581814 105 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 AC078899.2-201ENST00000595282 212 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 AL049861.1-201ENST00000603130 150 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 AC072026.1-201ENST00000605023 201 ntBASIC1.99□□□□□ -2.09
EPHA3P29320 JPX_2.1-201ENST00000614161 69 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms