Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RXRBP28702 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RXRBP28702 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RXRBP28702 RNU6-1080P-201ENST00000383982 107 ntBASIC3.34□□□□□ -1.87
RXRBP28702 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RXRBP28702 RNU6-57P-201ENST00000411348 103 ntBASIC3.34□□□□□ -1.87
RXRBP28702 AL031737.1-201ENST00000450125 223 ntBASIC3.34□□□□□ -1.87
RXRBP28702 AL031183.1-201ENST00000457667 207 ntBASIC3.34□□□□□ -1.87
RXRBP28702 AC003982.1-202ENST00000469928 248 ntBASIC3.34□□□□□ -1.87
RXRBP28702 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.34□□□□□ -1.87
RXRBP28702 RNA5SP385-201ENST00000515947 110 ntBASIC3.34□□□□□ -1.87
RXRBP28702 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.34□□□□□ -1.87
RXRBP28702 AC025166.1-201ENST00000612411 163 ntBASIC3.34□□□□□ -1.87
RXRBP28702 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.34□□□□□ -1.87
RXRBP28702 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.34□□□□□ -1.87
RXRBP28702 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RXRBP28702 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RXRBP28702 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RXRBP28702 MTND5P18-201ENST00000445624 1801 ntBASIC3.33□□□□□ -1.88
RXRBP28702 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
RXRBP28702 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RXRBP28702 Y_RNA.66-201ENST00000362862 102 ntBASIC3.33□□□□□ -1.88
RXRBP28702 RNA5SP139-201ENST00000364340 117 ntBASIC3.33□□□□□ -1.88
RXRBP28702 SNORA25.9-201ENST00000365087 128 ntBASIC3.33□□□□□ -1.88
RXRBP28702 MIR562-201ENST00000384894 95 ntBASIC3.33□□□□□ -1.88
RXRBP28702 RNU2-70P-201ENST00000410718 179 ntBASIC3.33□□□□□ -1.88
RXRBP28702 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
RXRBP28702 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
RXRBP28702 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
RXRBP28702 RPS29P24-201ENST00000486345 171 ntBASIC3.33□□□□□ -1.88
RXRBP28702 AC025647.1-201ENST00000517879 253 ntBASIC3.33□□□□□ -1.88
RXRBP28702 AC007751.1-201ENST00000529260 376 ntBASIC3.33□□□□□ -1.88
RXRBP28702 AC018630.3-201ENST00000542637 96 ntBASIC3.33□□□□□ -1.88
RXRBP28702 RPL23AP91-201ENST00000569211 455 ntBASIC3.33□□□□□ -1.88
RXRBP28702 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.33□□□□□ -1.88
RXRBP28702 AC008739.2-201ENST00000597006 317 ntBASIC3.33□□□□□ -1.88
RXRBP28702 AL022345.2-201ENST00000606307 135 ntBASIC3.33□□□□□ -1.88
RXRBP28702 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RXRBP28702 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RXRBP28702 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.33□□□□□ -1.88
RXRBP28702 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RXRBP28702 RNU6-944P-201ENST00000364023 107 ntBASIC3.32□□□□□ -1.88
RXRBP28702 Y_RNA.346-201ENST00000365385 112 ntBASIC3.32□□□□□ -1.88
RXRBP28702 RNU6-905P-201ENST00000384434 107 ntBASIC3.32□□□□□ -1.88
RXRBP28702 MIR624-201ENST00000385217 97 ntBASIC3.32□□□□□ -1.88
RXRBP28702 RNU6-554P-201ENST00000410466 106 ntBASIC3.32□□□□□ -1.88
RXRBP28702 AC097463.2-201ENST00000421074 142 ntBASIC3.32□□□□□ -1.88
RXRBP28702 AC108667.1-201ENST00000428618 249 ntBASIC3.32□□□□□ -1.88
RXRBP28702 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.32□□□□□ -1.88
RXRBP28702 Y_RNA.677-201ENST00000516401 85 ntBASIC3.32□□□□□ -1.88
RXRBP28702 MIR4753-201ENST00000585119 83 ntBASIC3.32□□□□□ -1.88
RXRBP28702 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RXRBP28702 Y_RNA.203-201ENST00000364106 102 ntBASIC3.31□□□□□ -1.88
RXRBP28702 SNORD18B-201ENST00000365659 72 ntBASIC3.31□□□□□ -1.88
RXRBP28702 MIR1302-4-201ENST00000408701 150 ntBASIC3.31□□□□□ -1.88
RXRBP28702 RPL30P4-201ENST00000429309 333 ntBASIC3.31□□□□□ -1.88
RXRBP28702 RPS4XP11-201ENST00000446897 772 ntBASIC3.31□□□□□ -1.88
RXRBP28702 RNA5SP236-201ENST00000516169 116 ntBASIC3.31□□□□□ -1.88
RXRBP28702 RNU1-104P-201ENST00000517280 175 ntBASIC3.31□□□□□ -1.88
RXRBP28702 AC105245.1-201ENST00000581934 244 ntBASIC3.31□□□□□ -1.88
RXRBP28702 MIR4635-201ENST00000583759 79 ntBASIC3.31□□□□□ -1.88
RXRBP28702 AL365205.2-201ENST00000594586 68 ntBASIC3.31□□□□□ -1.88
RXRBP28702 AC090115.4-201ENST00000609970 188 ntBASIC3.31□□□□□ -1.88
RXRBP28702 AC006435.5-201ENST00000624486 112 ntBASIC3.31□□□□□ -1.88
RXRBP28702 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RXRBP28702 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RXRBP28702 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.3□□□□□ -1.88
RXRBP28702 RNU6-1209P-201ENST00000363655 107 ntBASIC3.3□□□□□ -1.88
RXRBP28702 Y_RNA.281-201ENST00000364774 94 ntBASIC3.3□□□□□ -1.88
RXRBP28702 RNU6-1138P-201ENST00000365359 106 ntBASIC3.3□□□□□ -1.88
RXRBP28702 Y_RNA.486-201ENST00000384398 107 ntBASIC3.3□□□□□ -1.88
RXRBP28702 MIR29B2-201ENST00000385055 81 ntBASIC3.3□□□□□ -1.88
RXRBP28702 RNA5SP354-201ENST00000391247 136 ntBASIC3.3□□□□□ -1.88
RXRBP28702 RNU6-321P-201ENST00000410912 106 ntBASIC3.3□□□□□ -1.88
RXRBP28702 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
RXRBP28702 Z98742.2-201ENST00000431564 187 ntBASIC3.3□□□□□ -1.88
RXRBP28702 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.3□□□□□ -1.88
RXRBP28702 MIR3117-201ENST00000584034 78 ntBASIC3.3□□□□□ -1.88
RXRBP28702 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.3□□□□□ -1.88
RXRBP28702 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RXRBP28702 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.29□□□□□ -1.88
RXRBP28702 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RXRBP28702 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RXRBP28702 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.29□□□□□ -1.88
RXRBP28702 RNU1-72P-201ENST00000362976 153 ntBASIC3.29□□□□□ -1.88
RXRBP28702 RNU1-22P-201ENST00000363334 158 ntBASIC3.29□□□□□ -1.88
RXRBP28702 RNU6-640P-201ENST00000363693 105 ntBASIC3.29□□□□□ -1.88
RXRBP28702 RNU6-234P-201ENST00000365229 104 ntBASIC3.29□□□□□ -1.88
RXRBP28702 Y_RNA.348-201ENST00000365403 103 ntBASIC3.29□□□□□ -1.88
RXRBP28702 MIR767-201ENST00000390228 109 ntBASIC3.29□□□□□ -1.88
RXRBP28702 U8.13-201ENST00000390842 128 ntBASIC3.29□□□□□ -1.88
RXRBP28702 RNY4P30-201ENST00000410216 95 ntBASIC3.29□□□□□ -1.88
RXRBP28702 RNA5SP344-201ENST00000411081 104 ntBASIC3.29□□□□□ -1.88
RXRBP28702 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.29□□□□□ -1.88
RXRBP28702 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.29□□□□□ -1.88
RXRBP28702 RNU7-149P-201ENST00000516739 59 ntBASIC3.29□□□□□ -1.88
RXRBP28702 SCARNA11.3-201ENST00000517276 130 ntBASIC3.29□□□□□ -1.88
RXRBP28702 AC103810.6-201ENST00000606708 136 ntBASIC3.29□□□□□ -1.88
RXRBP28702 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RXRBP28702 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 251.3 ms