Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 Y_RNA.512-201ENST00000384518 102 ntBASIC1.19□□□□□ -2.22
RPA1P27694 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
RPA1P27694 RNU2-61P-201ENST00000411069 191 ntBASIC1.19□□□□□ -2.22
RPA1P27694 RPL21P38-201ENST00000418090 167 ntBASIC1.19□□□□□ -2.22
RPA1P27694 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
RPA1P27694 RNU6-897P-201ENST00000517135 105 ntBASIC1.19□□□□□ -2.22
RPA1P27694 SUMO2P16-201ENST00000519475 264 ntBASIC1.19□□□□□ -2.22
RPA1P27694 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.19□□□□□ -2.22
RPA1P27694 AC124312.5-201ENST00000604451 268 ntBASIC1.19□□□□□ -2.22
RPA1P27694 AC073349.3-201ENST00000617616 186 ntBASIC1.19□□□□□ -2.22
RPA1P27694 AC091895.1-201ENST00000624494 256 ntBASIC1.19□□□□□ -2.22
RPA1P27694 MIR6079-201ENST00000635807 62 ntBASIC1.19□□□□□ -2.22
RPA1P27694 AC018630.2-201ENST00000534866 2403 ntBASIC1.18□□□□□ -2.22
RPA1P27694 SNORA1B-201ENST00000362535 133 ntBASIC1.18□□□□□ -2.22
RPA1P27694 Y_RNA.267-201ENST00000364679 109 ntBASIC1.18□□□□□ -2.22
RPA1P27694 MIR873-201ENST00000401120 77 ntBASIC1.18□□□□□ -2.22
RPA1P27694 RNU5A-5P-201ENST00000411054 116 ntBASIC1.18□□□□□ -2.22
RPA1P27694 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.18□□□□□ -2.22
RPA1P27694 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
RPA1P27694 MTND5P22-201ENST00000458380 195 ntBASIC1.18□□□□□ -2.22
RPA1P27694 HMGN1P7-201ENST00000491722 313 ntBASIC1.18□□□□□ -2.22
RPA1P27694 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
RPA1P27694 Y_RNA.715-201ENST00000517082 110 ntBASIC1.18□□□□□ -2.22
RPA1P27694 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RPA1P27694 AC044792.1-201ENST00000593294 196 ntBASIC1.18□□□□□ -2.22
RPA1P27694 AL356055.1-201ENST00000602528 446 ntBASIC1.18□□□□□ -2.22
RPA1P27694 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
RPA1P27694 AC004832.4-201ENST00000608952 331 ntBASIC1.18□□□□□ -2.22
RPA1P27694 AC127459.3-201ENST00000624328 466 ntBASIC1.18□□□□□ -2.22
RPA1P27694 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
RPA1P27694 RNU6-324P-201ENST00000363957 106 ntBASIC1.17□□□□□ -2.22
RPA1P27694 RNU6-1048P-201ENST00000364054 107 ntBASIC1.17□□□□□ -2.22
RPA1P27694 Y_RNA.214-201ENST00000364201 112 ntBASIC1.17□□□□□ -2.22
RPA1P27694 Y_RNA.431-201ENST00000384086 102 ntBASIC1.17□□□□□ -2.22
RPA1P27694 RNU2-14P-201ENST00000411053 191 ntBASIC1.17□□□□□ -2.22
RPA1P27694 Z98949.2-201ENST00000440996 144 ntBASIC1.17□□□□□ -2.22
RPA1P27694 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.17□□□□□ -2.22
RPA1P27694 RPS4XP11-201ENST00000446897 772 ntBASIC1.17□□□□□ -2.22
RPA1P27694 AC093850.1-201ENST00000454121 251 ntBASIC1.17□□□□□ -2.22
RPA1P27694 HSPE1P25-201ENST00000455484 251 ntBASIC1.17□□□□□ -2.22
RPA1P27694 RPS23P4-201ENST00000487908 423 ntBASIC1.17□□□□□ -2.22
RPA1P27694 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
RPA1P27694 AC113195.1-201ENST00000579952 141 ntBASIC1.17□□□□□ -2.22
RPA1P27694 AL121655.1-201ENST00000605811 308 ntBASIC1.17□□□□□ -2.22
RPA1P27694 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
RPA1P27694 Y_RNA.64-201ENST00000362845 102 ntBASIC1.16□□□□□ -2.22
RPA1P27694 snoU2_19.2-201ENST00000363024 80 ntBASIC1.16□□□□□ -2.22
RPA1P27694 Y_RNA.222-201ENST00000364264 102 ntBASIC1.16□□□□□ -2.22
RPA1P27694 Y_RNA.331-201ENST00000365267 102 ntBASIC1.16□□□□□ -2.22
RPA1P27694 Y_RNA.389-201ENST00000383924 113 ntBASIC1.16□□□□□ -2.22
RPA1P27694 RNU6-1080P-201ENST00000383982 107 ntBASIC1.16□□□□□ -2.22
RPA1P27694 SNORA25-201ENST00000384384 134 ntBASIC1.16□□□□□ -2.22
RPA1P27694 MTCO3P19-201ENST00000415864 321 ntBASIC1.16□□□□□ -2.22
RPA1P27694 CALM2P4-201ENST00000430810 426 ntBASIC1.16□□□□□ -2.22
RPA1P27694 HSPE1P13-201ENST00000451143 297 ntBASIC1.16□□□□□ -2.22
RPA1P27694 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
RPA1P27694 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
RPA1P27694 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.16□□□□□ -2.22
RPA1P27694 AP003072.1-201ENST00000531740 145 ntBASIC1.16□□□□□ -2.22
RPA1P27694 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.16□□□□□ -2.22
RPA1P27694 MIR4300-201ENST00000581016 96 ntBASIC1.16□□□□□ -2.22
RPA1P27694 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
RPA1P27694 MIRLET7C-201ENST00000362160 84 ntBASIC1.15□□□□□ -2.23
RPA1P27694 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
RPA1P27694 RNU4-41P-201ENST00000364426 143 ntBASIC1.15□□□□□ -2.23
RPA1P27694 Y_RNA.418-201ENST00000384029 102 ntBASIC1.15□□□□□ -2.23
RPA1P27694 Y_RNA.551-201ENST00000384661 102 ntBASIC1.15□□□□□ -2.23
RPA1P27694 MIR660-201ENST00000385235 97 ntBASIC1.15□□□□□ -2.23
RPA1P27694 U8.16-201ENST00000391279 133 ntBASIC1.15□□□□□ -2.23
RPA1P27694 Y_RNA.602-201ENST00000410535 92 ntBASIC1.15□□□□□ -2.23
RPA1P27694 STAG3L5P-204ENST00000443759 179 ntBASIC1.15□□□□□ -2.23
RPA1P27694 MTATP8P1-201ENST00000467115 207 ntBASIC1.15□□□□□ -2.23
RPA1P27694 OR9P1P-201ENST00000496431 281 ntBASIC1.15□□□□□ -2.23
RPA1P27694 RNU7-28P-201ENST00000516759 62 ntBASIC1.15□□□□□ -2.23
RPA1P27694 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
RPA1P27694 MIR4778-201ENST00000577635 80 ntBASIC1.15□□□□□ -2.23
RPA1P27694 RPS29P30-201ENST00000600975 111 ntBASIC1.15□□□□□ -2.23
RPA1P27694 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
RPA1P27694 SNORD3E-202ENST00000627253 216 ntBASIC1.15□□□□□ -2.23
RPA1P27694 Y_RNA.16-201ENST00000362421 102 ntBASIC1.14□□□□□ -2.23
RPA1P27694 SNORD113-8-201ENST00000363497 74 ntBASIC1.14□□□□□ -2.23
RPA1P27694 Y_RNA.210-201ENST00000364161 110 ntBASIC1.14□□□□□ -2.23
RPA1P27694 SNORA33.2-201ENST00000365413 134 ntBASIC1.14□□□□□ -2.23
RPA1P27694 Y_RNA.439-201ENST00000384119 94 ntBASIC1.14□□□□□ -2.23
RPA1P27694 RNU6-1310P-201ENST00000384153 107 ntBASIC1.14□□□□□ -2.23
RPA1P27694 RNU6-376P-201ENST00000384731 106 ntBASIC1.14□□□□□ -2.23
RPA1P27694 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
RPA1P27694 SNORD115-46-201ENST00000390982 71 ntBASIC1.14□□□□□ -2.23
RPA1P27694 MIR1252-201ENST00000408861 65 ntBASIC1.14□□□□□ -2.23
RPA1P27694 AC233266.1-201ENST00000454518 96 ntBASIC1.14□□□□□ -2.23
RPA1P27694 LINC01399-202ENST00000458450 244 ntBASIC1.14□□□□□ -2.23
RPA1P27694 RNU6-475P-201ENST00000516073 104 ntBASIC1.14□□□□□ -2.23
RPA1P27694 RNU7-110P-201ENST00000516891 62 ntBASIC1.14□□□□□ -2.23
RPA1P27694 RPL21P9-201ENST00000556149 474 ntBASIC1.14□□□□□ -2.23
RPA1P27694 AC242852.1-201ENST00000612151 96 ntBASIC1.14□□□□□ -2.23
RPA1P27694 AC244015.1-201ENST00000622301 99 ntBASIC1.14□□□□□ -2.23
RPA1P27694 AC106754.2-201ENST00000623006 233 ntBASIC1.14□□□□□ -2.23
RPA1P27694 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
RPA1P27694 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RPA1P27694 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms