Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNU4-67P-201ENST00000364569 141 ntBASIC3.57□□□□□ -1.84
VARSP26640 RNU6-402P-201ENST00000410678 103 ntBASIC3.57□□□□□ -1.84
VARSP26640 BTF3P4-201ENST00000418852 495 ntBASIC3.57□□□□□ -1.84
VARSP26640 MRPL35P3-201ENST00000421557 364 ntBASIC3.57□□□□□ -1.84
VARSP26640 AL512326.2-201ENST00000426359 151 ntBASIC3.57□□□□□ -1.84
VARSP26640 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
VARSP26640 RNU7-94P-201ENST00000459576 63 ntBASIC3.57□□□□□ -1.84
VARSP26640 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.57□□□□□ -1.84
VARSP26640 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
VARSP26640 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
VARSP26640 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VARSP26640 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VARSP26640 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VARSP26640 SNORD115-19-201ENST00000363098 82 ntBASIC3.56□□□□□ -1.84
VARSP26640 SNORD115-18-201ENST00000363293 82 ntBASIC3.56□□□□□ -1.84
VARSP26640 SNORD115-17-201ENST00000364612 82 ntBASIC3.56□□□□□ -1.84
VARSP26640 RNU6-675P-201ENST00000384236 104 ntBASIC3.56□□□□□ -1.84
VARSP26640 SNORA18-201ENST00000384416 132 ntBASIC3.56□□□□□ -1.84
VARSP26640 SNORD116-22-201ENST00000384430 92 ntBASIC3.56□□□□□ -1.84
VARSP26640 MIR218-2-201ENST00000385006 110 ntBASIC3.56□□□□□ -1.84
VARSP26640 AL627390.1-201ENST00000396055 340 ntBASIC3.56□□□□□ -1.84
VARSP26640 SNORA11.2-201ENST00000408318 127 ntBASIC3.56□□□□□ -1.84
VARSP26640 RNA5SP144-201ENST00000410846 116 ntBASIC3.56□□□□□ -1.84
VARSP26640 AL035423.1-201ENST00000420331 213 ntBASIC3.56□□□□□ -1.84
VARSP26640 RPS23P4-201ENST00000487908 423 ntBASIC3.56□□□□□ -1.84
VARSP26640 AC092185.1-201ENST00000491371 97 ntBASIC3.56□□□□□ -1.84
VARSP26640 AC004812.1-201ENST00000540773 146 ntBASIC3.56□□□□□ -1.84
VARSP26640 AC064859.1-201ENST00000624741 174 ntBASIC3.56□□□□□ -1.84
VARSP26640 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.56□□□□□ -1.84
VARSP26640 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VARSP26640 U8.5-201ENST00000364528 136 ntBASIC3.55□□□□□ -1.84
VARSP26640 RNU6-60P-201ENST00000364792 103 ntBASIC3.55□□□□□ -1.84
VARSP26640 Y_RNA.336-201ENST00000365307 109 ntBASIC3.55□□□□□ -1.84
VARSP26640 U8.11-201ENST00000384699 133 ntBASIC3.55□□□□□ -1.84
VARSP26640 SNORA80E-201ENST00000384744 137 ntBASIC3.55□□□□□ -1.84
VARSP26640 MIR183-201ENST00000384958 110 ntBASIC3.55□□□□□ -1.84
VARSP26640 RNU6-279P-201ENST00000391297 101 ntBASIC3.55□□□□□ -1.84
VARSP26640 RNU2-48P-201ENST00000410694 191 ntBASIC3.55□□□□□ -1.84
VARSP26640 AL022718.1-201ENST00000412004 84 ntBASIC3.55□□□□□ -1.84
VARSP26640 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.55□□□□□ -1.84
VARSP26640 MICF-203ENST00000432679 129 ntBASIC3.55□□□□□ -1.84
VARSP26640 CYCSP35-201ENST00000451978 304 ntBASIC3.55□□□□□ -1.84
VARSP26640 AL109933.2-201ENST00000452651 260 ntBASIC3.55□□□□□ -1.84
VARSP26640 U8.18-201ENST00000459285 133 ntBASIC3.55□□□□□ -1.84
VARSP26640 RPS27P29-201ENST00000463110 252 ntBASIC3.55□□□□□ -1.84
VARSP26640 MIR5588-201ENST00000581890 63 ntBASIC3.55□□□□□ -1.84
VARSP26640 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.55□□□□□ -1.84
VARSP26640 AC095038.3-201ENST00000634439 195 ntBASIC3.55□□□□□ -1.84
VARSP26640 MIR7157-201ENST00000635801 60 ntBASIC3.55□□□□□ -1.84
VARSP26640 MIR7515-201ENST00000637837 67 ntBASIC3.55□□□□□ -1.84
VARSP26640 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
VARSP26640 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VARSP26640 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VARSP26640 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VARSP26640 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.54□□□□□ -1.84
VARSP26640 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VARSP26640 Y_RNA.313-201ENST00000365095 103 ntBASIC3.54□□□□□ -1.84
VARSP26640 RNU6-1296P-201ENST00000383879 107 ntBASIC3.54□□□□□ -1.84
VARSP26640 RNU6-979P-201ENST00000383896 107 ntBASIC3.54□□□□□ -1.84
VARSP26640 Y_RNA.437-201ENST00000384113 113 ntBASIC3.54□□□□□ -1.84
VARSP26640 RNA5SP293-201ENST00000410527 113 ntBASIC3.54□□□□□ -1.84
VARSP26640 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.54□□□□□ -1.84
VARSP26640 AC006989.1-201ENST00000427212 131 ntBASIC3.54□□□□□ -1.84
VARSP26640 AL035398.1-201ENST00000430869 322 ntBASIC3.54□□□□□ -1.84
VARSP26640 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
VARSP26640 CYP2C59P-201ENST00000457790 269 ntBASIC3.54□□□□□ -1.84
VARSP26640 RN7SL601P-201ENST00000471221 293 ntBASIC3.54□□□□□ -1.84
VARSP26640 RN7SL442P-201ENST00000473804 320 ntBASIC3.54□□□□□ -1.84
VARSP26640 SEM1P1-201ENST00000506694 209 ntBASIC3.54□□□□□ -1.84
VARSP26640 RNU6-267P-201ENST00000516714 103 ntBASIC3.54□□□□□ -1.84
VARSP26640 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.54□□□□□ -1.84
VARSP26640 MIR4777-201ENST00000583710 86 ntBASIC3.54□□□□□ -1.84
VARSP26640 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.54□□□□□ -1.84
VARSP26640 AC091304.10-201ENST00000641554 121 ntBASIC3.54□□□□□ -1.84
VARSP26640 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VARSP26640 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
VARSP26640 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
VARSP26640 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VARSP26640 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VARSP26640 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VARSP26640 MIR1289-1-201ENST00000408836 144 ntBASIC3.53□□□□□ -1.84
VARSP26640 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.53□□□□□ -1.84
VARSP26640 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
VARSP26640 RN7SL293P-201ENST00000481765 281 ntBASIC3.53□□□□□ -1.84
VARSP26640 AL163195.1-201ENST00000496941 348 ntBASIC3.53□□□□□ -1.84
VARSP26640 AL353149.1-201ENST00000610667 244 ntBASIC3.53□□□□□ -1.84
VARSP26640 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
VARSP26640 AP000553.6-201ENST00000641242 118 ntBASIC3.53□□□□□ -1.84
VARSP26640 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VARSP26640 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
VARSP26640 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VARSP26640 MIR95-201ENST00000385072 81 ntBASIC3.52□□□□□ -1.85
VARSP26640 NDUFB4P4-201ENST00000404822 243 ntBASIC3.52□□□□□ -1.85
VARSP26640 SNORA7.5-201ENST00000410672 110 ntBASIC3.52□□□□□ -1.85
VARSP26640 TRBV12-1-201ENST00000479785 344 ntBASIC3.52□□□□□ -1.85
VARSP26640 RNU6-857P-201ENST00000515893 110 ntBASIC3.52□□□□□ -1.85
VARSP26640 MIR7851-201ENST00000610611 160 ntBASIC3.52□□□□□ -1.85
VARSP26640 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.52□□□□□ -1.85
VARSP26640 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.52□□□□□ -1.85
VARSP26640 CTSLP2-204ENST00000629029 392 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms