Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 Y_RNA.462-201ENST00000384268 102 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 RNU6-1105P-201ENST00000384774 107 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 MIR891A-201ENST00000401237 79 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 AL390729.2-201ENST00000416137 156 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 MCFD2P1-201ENST00000417812 300 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 MTND4P19-201ENST00000446659 478 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 HMGN1P7-201ENST00000491722 313 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 CYCTP-201ENST00000504253 315 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
PDGFRAP16234 AC011604.1-201ENST00000545978 196 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.21□□□□□ -2.22
PDGFRAP16234 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.21□□□□□ -2.22
PDGFRAP16234 AL357312.1-201ENST00000603879 298 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 AC004832.4-201ENST00000608952 331 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 AC090971.5-201ENST00000621102 293 ntBASIC1.21□□□□□ -2.22
PDGFRAP16234 Y_RNA.172-201ENST00000363765 102 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 RNU6-710P-201ENST00000410424 105 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 PMCHL1-202ENST00000423102 261 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 AC005042.3-201ENST00000453230 174 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 RNU6-475P-201ENST00000516073 104 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 RNU6-1116P-201ENST00000517269 99 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 MIR4762-201ENST00000585261 75 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 AC120024.3-201ENST00000603167 156 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 AC005972.2-201ENST00000604690 348 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 AL121655.1-201ENST00000605811 308 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 Y_RNA.772-201ENST00000606692 102 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 PART1_1.1-201ENST00000611761 217 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 MIR8070-201ENST00000616510 88 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
PDGFRAP16234 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PDGFRAP16234 SNORD68-201ENST00000363214 84 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 Y_RNA.148-201ENST00000363557 117 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 U8.5-201ENST00000364528 136 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 Y_RNA.329-201ENST00000365209 107 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 Y_RNA.445-201ENST00000384168 102 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 RNU6-474P-201ENST00000384243 107 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 Y_RNA.621-201ENST00000411065 96 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 U8.19-201ENST00000459095 133 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 AC040926.1-201ENST00000530195 238 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 RPS29P30-201ENST00000600975 111 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 AL591926.4-201ENST00000616895 298 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 AC090574.1-201ENST00000623186 233 ntBASIC1.19□□□□□ -2.22
PDGFRAP16234 Y_RNA.460-201ENST00000384255 102 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 RNU6-163P-201ENST00000384396 106 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 MIR1302-11-201ENST00000408051 138 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 MIR1302-9-201ENST00000408365 138 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 MIR1302-10-201ENST00000408734 138 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 RNU6-130P-201ENST00000411112 103 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 RPS20P10-201ENST00000451209 253 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 SNORA25.10-201ENST00000515926 124 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 BX284668.6-201ENST00000606899 438 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 MIR1302-2-201ENST00000607096 138 ntBASIC1.18□□□□□ -2.22
PDGFRAP16234 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.18□□□□□ -2.22
PDGFRAP16234 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PDGFRAP16234 Y_RNA.138-201ENST00000363462 102 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 Y_RNA.471-201ENST00000384312 102 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 MIR526A1-201ENST00000384897 85 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
PDGFRAP16234 Y_RNA.645-201ENST00000391229 102 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 RNA5SP247-201ENST00000411181 105 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.17□□□□□ -2.22
PDGFRAP16234 AC104332.1-201ENST00000440471 797 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.17□□□□□ -2.22
PDGFRAP16234 COX6CP14-201ENST00000469580 174 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 SNORA70.22-201ENST00000517160 124 ntBASIC1.17□□□□□ -2.22
PDGFRAP16234 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
PDGFRAP16234 RNU6-937P-201ENST00000384325 106 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 SNORA72-201ENST00000384339 132 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 Y_RNA.526-201ENST00000384572 110 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 PIGPP3-201ENST00000425307 415 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 AC245047.7-201ENST00000440265 293 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 AC048334.1-201ENST00000477975 159 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 AC010655.3-201ENST00000478818 450 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 AC114811.1-201ENST00000507207 168 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 Y_RNA.713-201ENST00000517013 96 ntBASIC1.16□□□□□ -2.22
PDGFRAP16234 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
PDGFRAP16234 SNORD81.1-201ENST00000363064 77 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 RNU6-797P-201ENST00000363101 109 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 RNU4-50P-201ENST00000364361 141 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 Y_RNA.331-201ENST00000365267 102 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 SNORD14.1-201ENST00000365609 90 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 Y_RNA.439-201ENST00000384119 94 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 LINC01399-202ENST00000458450 244 ntBASIC1.15□□□□□ -2.23
PDGFRAP16234 U8.20-201ENST00000459445 131 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms